Rubredoxin

Details

Name
Rubredoxin
Synonyms
  • Rd
Gene Name
rub
Organism
Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)
Amino acid sequence
>lcl|BSEQ0017322|Rubredoxin
MKKYVCTVCGYEYDPAEGDPDNGVKPGTSFDDLPADWVCPVCGAPKSEFEAA
Number of residues
52
Molecular Weight
5574.145
Theoretical pI
3.87
GO Classification
Functions
electron carrier activity / iron ion binding
Processes
oxidation-reduction process
Components
cytoplasm
General Function
Iron ion binding
Specific Function
Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.Electron acceptor for cytoplasmic lactate dehydrogenase.
Pfam Domain Function
Transmembrane Regions
Not Available
Cellular Location
Cytoplasm
Gene sequence
>lcl|BSEQ0017323|Rubredoxin (rub)
ATGAAAAAGTACGTATGCACCGTCTGCGGTTACGAATACGACCCTGCTGAAGGCGACCCC
GACAACGGCGTGAAGCCCGGCACCTCGTTCGACGACCTGCCGGCCGACTGGGTATGCCCC
GTGTGCGGCGCCCCCAAGAGCGAATTCGAAGCCGCCTAG
Chromosome Location
Not Available
Locus
Not Available
External Identifiers
ResourceLink
UniProtKB IDP00269
UniProtKB Entry NameRUBR_DESVH
GenBank Protein ID758676
GenBank Gene IDM28848
General References
  1. Brumlik MJ, Voordouw G: Analysis of the transcriptional unit encoding the genes for rubredoxin (rub) and a putative rubredoxin oxidoreductase (rbo) in Desulfovibrio vulgaris Hildenborough. J Bacteriol. 1989 Sep;171(9):4996-5004. [Article]
  2. Voordouw G: Cloning of genes encoding redox proteins of known amino acid sequence from a library of the Desulfovibrio vulgaris (Hildenborough) genome. Gene. 1988 Jul 15;67(1):75-83. [Article]
  3. Bruschi M: Non-heme iron proteins. The amino acid sequence of rubredoxin from Desulfovibrio vulgaris. Biochim Biophys Acta. 1976 May 20;434(1):4-17. [Article]
  4. Heidelberg JF, Seshadri R, Haveman SA, Hemme CL, Paulsen IT, Kolonay JF, Eisen JA, Ward N, Methe B, Brinkac LM, Daugherty SC, Deboy RT, Dodson RJ, Durkin AS, Madupu R, Nelson WC, Sullivan SA, Fouts D, Haft DH, Selengut J, Peterson JD, Davidsen TM, Zafar N, Zhou L, Radune D, Dimitrov G, Hance M, Tran K, Khouri H, Gill J, Utterback TR, Feldblyum TV, Wall JD, Voordouw G, Fraser CM: The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough. Nat Biotechnol. 2004 May;22(5):554-9. Epub 2004 Apr 11. [Article]
  5. Adman ET, Sieker LC, Jensen LH, Bruschi M, Le Gall J: A structural model of rubredoxin from Desulfovibrio vulgaris at 2 A resolution. J Mol Biol. 1977 May 5;112(1):113-20. [Article]
  6. Adman ET, Sieker LC, Jensen LH: Structure of rubredoxin from Desulfovibrio vulgaris at 1.5 A resolution. J Mol Biol. 1991 Jan 20;217(2):337-52. [Article]

Drug Relations

Drug Relations
DrugBank IDNameDrug groupPharmacological action?ActionsDetails
DB04464N-FormylmethionineexperimentalunknownDetails