Genome polyprotein
Details
- Name
- Genome polyprotein
- Synonyms
- Not Available
- Gene Name
- Not Available
- Organism
- Coxsackievirus A21
- Amino acid sequence
>lcl|BSEQ0012958|Genome polyprotein MGAQVSTQKTGAHENQNVAANGSTINYTTINYYKDSASNSATRQDLSQDPSKFTEPVKDL MLKTAPALNSPNVEACGYSDRVRQITLGNSTITTQEAANAIVAYGEWPTYINDSEANPVD APTEPDVSSNRFYTLESVSWKTTSRGWWWKLPDCLKDMGMFGQNMYYHYLGRSGYTIHVQ CNASKFHQGALGVFLIPEFVMACNTESKTSYVSYINANPGERGGEFTNTYNPSNTDASEG RKFAALDYLLGSGVLAGNAFVYPHQIINLRTNNSATIVVPYVNSLVIDCMAKHNNWGIVI LPLAPLAFAATSSPQVPITVTIAPMCTEFNGLRNITVPVHQGLPTMNTPGSNQFLTSDDF QSPCALPNFDVTPPIHIPGEVKNMMELAEIDTLIPMNAVDGKVNTMEMYQIPLNDNLSKA PIFCLSLSPASDKRLSRTMLGEILNYYTHWTGSIRFTFLFCGSMMATGKLLLSYSPPGAK PPTNRKDAMLGTHIIWDLGLQSSCSMVAPWISNTVYRRCARDDFTEGGFITCFYQTRIVV PASTPTSMFMLGFVSACPDFSVRLLRDTPHISQSKLIGRTQGIEDLIDTAIKNALRVSQP PSTQSTEATSGVNSQEVPALTAVETGASGQAIPSDVVETRHVVNYKTRSESCLESFFGRA ACVTILSLTNSSKSGEEKKHFNIWNITYTDTVQLRRKLEFFTYSRFDLEMTFVFTENYPS TASGEVRNQVYQIMYIPPGAPRPSSWDDYTWQSSSNPSIFYMYGNAPPRMSIPYVGIANA YSHFYDGFARVPLEGENTDAGDTFYGLVSINDFGVLAVRAVNRSNPHTIHTSVRVYMKPK HIRCWCPRPPRAVLYRGEGVDMISSAILPLTKVDSITTFGFGHQNKAVYVAGYKICNYHL ATPSDHLNAISMLWDRDLMVVESRAQGTDTIARCSCRCGVYYCESRRKYYPVTFTGPTFR FMEANDYYPARYQSHMLIGCGFAEPGDCGGILRCTHGVIGIITAGGEGVVAFADIRDLWV YEEEAMEQGITSYIESLGTAFGAGFTHTISEKVTELTTMVTSTITEKLLKNLVKIVSALV IVVRNYEDTTTILATLALLGCDISPWQWLKKKACDLLEIPYVMRQGDGWMKKFTEACNAA KGLEWISNKISKFIDWLKCKIIPDAKDKVEFLTKLKQLDMLENQIATIHQSCPSQEQQEI LFNNVRWLAVQSRRFAPLYAVEARRINKMESTINNYIQFKSKHRIEPVCMLIHGSPGTGK SIATSLIGRAIAEKESTSVYSMPPDPSHFDGYKQQGVVIMDDLNQNPDGMDMKLFCQMVS TVEFIPPMASLEEKGILFTSDYVLASTNSHSIVPPTVAHSDALTRRFAFDVEVYTMSEHS VKGKLNMATATQLCKDCPTPANFKKCCPLVCGKALQLMDRYTRQRFTVDEITTLIMNEKN RRANIGNCMEALFQGPLRYKDLKIDVKTVPPPECISDLLQAVDSQEVRDYCEKKGWIVNV TSQIQLERNINRAMTILQAVTTFAAVAGVVYVMYKLFAGQQGAYTGLPNKKPNVPTIRVA KVQGPGFDYAVAMAKRNIVTATTTKGEFTMLGVHDNVAILPTHAAPGETIIIDGKEVEIL DARALEDQAGTNLEITIITLKRNEKFRDIRSHIPTQITETNDGVLIVNTSKYPNMYVPVG AVTEQGYLNLSGRQTARTLMYNFPTRAGQCGGIITCTGKVIGMHVGGNGSHGFAAALKRS YFTQNQGEIQWMRSSKEVGYPIINAPSKTKLEPSAFHYVFEGVKEPAVLTKNDPRLKTDF EEAIFSKYVGNKITEVDEYMKEAVDHYAGQLMSLDINTEQMCLEDAMYGTDGLEALDLST SAGYPYVAMGKKKRDILDKQTRDTKEMQRLLDTYGINLPLVTYVKDELRSKTKVEQGKSR LIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWSKIPVLMEEKLFAFDY TGYDASLSPAWFEALKMVLEKIGFGSRVDYIDYLNHSHHLYKNKTYCVKGGMPSGCSGTS IFNSMINNLIIRTLLLRTYKGIDLDHLKMIAYGDDVIASYPHEVDASLLAQSGKDYGLTM TPADKSVTFETVTWENVTFLKRFFRADEKYPFLVHPVMPMKEIHESIRWTKDPRNTQDHV RSLCLLAWHNGEEEYNKFLAKIRSVPIGRALLLPEYSTLYRRWLDSF
- Number of residues
- 2207
- Molecular Weight
- 246035.23
- Theoretical pI
- 7.13
- GO Classification
- FunctionsATP binding / cysteine-type endopeptidase activity / ion channel activity / RNA binding / RNA helicase activity / RNA-directed RNA polymerase activity / structural molecule activityProcessespore formation by virus in membrane of host cell / protein oligomerization / RNA-protein covalent cross-linking / transcription, DNA-templated / viral entry into host cell / viral RNA genome replication / virion attachment to host cellComponentshost cell cytoplasmic vesicle / integral to membrane of host cell / membrane / viral capsid
- General Function
- Structural molecule activity
- Specific Function
- Not Available
- Pfam Domain Function
- Transmembrane Regions
- Not Available
- Cellular Location
- Host cytoplasm
- Gene sequence
>lcl|BSEQ0008065|6624 bp ATGGGGGCTCAAGTTTCAACGCAAAAGACCGGTGCGCACGAGAATCAAAACGTGGCAGCC AATGGATCCACCATTAATTACACTACTATCAACTATTACAAAGACAGTGCGAGTAATTCC GCTACTAGACAAGACCTCTCCCAAGATCCATCAAAATTCACAGAACCGGTTAAGGACTTA ATGTTGAAAACAGCACCAGCTCTAAACTCGCCTAACGTGGAAGCATGTGGGTACAGTGAC CGTGTGAGGCAAATCACTTTAGGCAACTCGACTATTACTACACAAGAAGCAGCCAATGCT ATTGTTGCTTACGGTGAATGGCCCACTTACATAAATGATTCAGAAGCTAATCCGGTAGAT GCACCCACTGAGCCAGACGTTAGTAGCAACCGGTTTTACACCCTAGAATCGGTGTCTTGG AAGACCACTTCAAGGGGATGGTGGTGGAAGTTACCAGATTGTTTGAAGGACATGGGAATG TTTGGTCAGAATATGTACTATCACTACTTGGGGCGCTCTGGTTACACCATTCATGTCCAG TGCAACGCTTCAAAATTTCACCAAGGGGCGTTAGGAGTTTTTCTGATACCAGAGTTTGTC ATGGCTTGCAACACTGAGAGTAAAACGTCATACGTTTCATACATCAATGCAAATCCTGGT GAGAGAGGCGGTGAGTTTACGAACACCTACAATCCGTCAAATACAGACGCCAGTGAGGGC AGAAAGTTTGCAGCATTGGATTATTTGCTGGGTTCTGGTGTTCTAGCAGGAAACGCCTTT GTGTACCCGCACCAGATCATCAACCTACGTACCAACAACAGTGCAACAATTGTGGTGCCA TACGTAAACTCACTTGTGATTGATTGTATGGCAAAACACAATAACTGGGGCATTGTCATA TTACCACTGGCACCCTTGGCCTTTGCCGCAACATCGTCACCACAGGTGCCTATTACAGTG ACCATTGCACCCATGTGTACAGAATTCAATGGGTTGAGAAACATCACCGTCCCAGTACAT CAAGGGTTGCCGACAATGAACACACCTGGTTCCAATCAATTCCTTACATCTGATGACTTC CAGTCGCCCTGTGCCTTACCTAATTTTGATGTTACTCCACCAATACACATACCCGGGGAA GTAAAGAATATGATGGAACTAGCTGAAATTGACACATTGATCCCAATGAACGCAGTGGAC GGGAAGGTGAACACAATGGAGATGTATCAAATACCATTGAATGACAATTTGAGCAAGGCA CCTATATTCTGTTTATCCCTATCACCTGCTTCTGATAAACGACTGAGCCGCACCATGTTG GGTGAAATCCTAAATTATTACACCCATTGGACGGGGTCCATCAGGTTCACCTTTCTATTT TGTGGTAGTATGATGGCCACTGGTAAACTGCTCCTCAGCTATTCCCCACCGGGAGCTAAA CCACCAACCAATCGCAAGGATGCAATGCTAGGCACACACATCATCTGGGACCTAGGGTTA CAATCCAGTTGTTCCATGGTTGCACCGTGGATCTCCAACACAGTGTACAGACGGTGTGCA CGTGATGACTTCACTGAGGGCGGATTTATAACTTGCTTCTATCAAACTAGAATTGTGGTA CCTGCTTCAACCCCTACCAGTATGTTCATGTTAGGCTTTGTTAGTGCGTGTCCAGACTTC AGTGTCAGACTGCTTAGGGACACTCCCCATATTAGTCAATCGAAACTAATAGGACGTACA CAAGGCATTGAAGACCTCATTGACACAGCGATAAAGAATGCCTTAAGAGTGTCCCAACCA CCCTCGACCCAGTCAACTGAAGCAACTAGTGGAGTGAATAGCCAGGAGGTGCCAGCTCTA ACTGCTGTGGAAACAGGAGCATCTGGTCAAGCAATCCCCAGTGATGTGGTGGAAACTAGG CACGTGGTAAATTACAAAACCAGGTCTGAATCGTGTCTTGAGTCATTCTTTGGGAGAGCT GCGTGTGTCACAATCCTATCCTTGACCAACTCCTCCAAGAGCGGAGAGGAGAAAAAGCAT TTCAACATATGGAATATTACATACACCGACACTGTCCAGTTACGCAGAAAATTAGAGTTT TTCACGTATTCCAGGTTTGATCTTGAAATGACTTTTGTATTCACAGAGAACTATCCTAGT ACAGCCAGTGGAGAAGTGCGAAACCAGGTGTACCAGATCATGTATATTCCACCAGGGGCA CCCCGCCCATCATCCTGGGATGACTACACATGGCAATCCTCTTCAAACCCTTCCATCTTC TACATGTATGGAAATGCACCTCCACGGATGTCAATTCCTTACGTAGGGATTGCCAATGCC TATTCACACTTCTACGATGGCTTTGCACGGGTGCCACTTGAGGGTGAGAACACCGATGCT GGCGACACGTTTTACGGTTTAGTGTCCATAAATGATTTTGGAGTTTTAGCAGTTAGAGCA GTAAACCGCAGTAATCCACATACAATACACACATCTGTGAGAGTGTACATGAAACCAAAA CACATTCGGTGTTGGTGCCCCAGACCTCCTCGAGCTGTATTATACAGGGGAGAGGGAGTG GACATGATATCCAGTGCAATTCTACCTCTGACCAAGGTAGACTCAATTACCACTTTTGGG TTTGGTCATCAGAACAAAGCAGTGTACGTTGCCGGTTACAAGATTTGCAACTACCACCTA GCAACCCCAAGTGATCACTTGAATGCAATTAGTATGTTATGGGACAGGGATTTAATGGTG GTGGAATCTAGAGCCCAGGGAACTGATACCATCGCCAGATGTAGTTGCAGGTGTGGAGTT TACTATTGTGAATCTAGGAGGAAGTACTACCCTGTCACTTTTACTGGCCCAACGTTTCGA TTCATGGAAGCAAACGACTACTATCCAGCAAGATACCAGTCTCACATGCTGATAGGGTGC GGATTTGCAGAACCCGGGGACTGCGGTGGGATACTGAGGTGCACTCATGGGGTAATTGGT ATCATTACTGCAGGAGGTGAAGGGGTAGTAGCCTTTGCTGACATTAGAGACCTCTGGGTG TATGAAGAGGAGGCCATGGAACAGGGAATAACAAGCTACATCGAATCTCTCGGCACAGCC TTTGGCGCAGGGTTCACCCACACAATCAGTGAGAAAGTGACTGAATTGACAACAATGGTT ACCAGCACTATCACAGAAAAACTACTGAAAAACTTGGTGAAAATAGTGTCGGCTCTAGTG ATTGTTGTGAGAAATTATGAGGACACTACCACGATCCTTGCAACACTAGCACTACTCGGG TGTGATATATCTCCTTGGCAATGGTTGAAGAAGAAGGCATGTGACTTACTAGAGATTCCT TATGTGATGCGCCAAGGTGATGGGTGGATGAAGAAATTCACAGAGGCGTGCAATGCAGCT AAAGGCTTAGAGTGGATTAGCAACAAAATTTCCAAGTTTATAGATTGGTTGAAGTGTAAA ATTATCCCAGACGCTAAGGACAAGGTGGAATTTCTCACCAAGTTGAAACAGCTAGACATG TTGGAAAATCAAATTGCAACCATCCACCAATCTTGCCCCAGCCAAGAACAACAAGAGATT CTTTTCAACAATGTGAGATGGCTAGCAGTCCAGTCCCGTCGGTTTGCACCATTATACGCT GTGGAGGCACGCCGAATTAACAAAATGGAGAGCACAATAAACAATTATATACAGTTCAAG AGCAAACACCGTATTGAACCAGTATGTATGCTCATTCATGGGTCACCAGGGACGGGTAAA TCTATAGCTACTTCATTAATAGGTAGAGCAATAGCAGAGAAGGAAAGCACATCAGTCTAT TCAATGCCACCTGACCCATCTCACTTTGATGGCTATAAACAACAAGGGGTAGTGATTATG GACGACCTAAACCAAAACCCCGATGGTATGGACATGAAACTGTTTTGCCAAATGGTATCA ACAGTGGAGTTTATTCCTCCAATGGCCTCATTAGAGGAGAAGGGCATTTTGTTTACATCT GATTATGTCCTGGCTTCTACCAACTCTCATTCAATTGTACCACCCACAGTGGCTCACAGT GATGCCTTAACCAGACGATTTGCATTTGATGTGGAGGTTTACACGATGTCTGAACATTCA GTCAAAGGCAAACTGAATATGGCCACGGCCACTCAATTGTGTAAGGATTGTCCAACACCT GCAAATTTTAAAAAGTGTTGCCCTCTCGTTTGTGGAAAGGCCTTGCAATTAATGGACAGG TACACCAGACAAAGGTTCACTGTAGATGAGATTACCACATTAATCATGAATGAGAAAAAC AGAAGGGCCAATATCGGCAATTGCATGGAAGCCTTGTTTCAAGGACCATTAAGGTATAAA GATTTGAAGATCGATGTGAAGACAGTTCCCCCCCCTGAGTGCATCAGTGATTTGTTACAA GCAGTGGATTCTCAAGAGGTTAGGGATTACTGTGAGAAGAAAGGCTGGATCGTTAACGTT ACTAGCCAGATTCAACTAGAAAGGAACATCAATAGGGCCATGACTATACTCCAAGCTGTT ACCACATTCGCAGCAGTCGCAGGAGTAGTGTATGTAATGTACAAACTCTTCGCCGGTCAA CAGGGTGCATACACTGGCTTGCCAAACAAAAAACCCAATGTCCCTACTATCAGAGTCGCT AAAGTCCAGGGGCCAGGATTTGACTACGCAGTGGCAATGGCAAAAAGAAACATAGTTACT GCAACCACCACCAAGGGTGAATTTACCATGCTAGGGGTGCATGATAATGTAGCAATATTG CCAACCCATGCCGCTCCAGGAGAAACCATTATTATTGATGGGAAAGAAGTAGAGATCCTA GATGCCAGAGCCTTAGAAGATCAAGCGGGAACCAATCTTGAGATCACCATTATTACTCTA AAAAGAAATGAGAAGTTTAGAGACATCAGATCACATATTCCCACCCAAATTACTGAAACT AACGATGGAGTGTTGATCGTGAACACTAGCAAGTACCCCAATATGTATGTCCCCGTTGGT GCTGTGACCGAACAGGGATATCTTAATCTCAGTGGACGTCAAACTGCTCGCACTTTAATG TACAACTTTCCAACAAGGGCAGGCCAGTGCGGAGGAATCATCACTTGTACTGGCAAAGTC ATTGGGATGCATGTTGGCGGGAACGGTTCACATGGGTTTGCAGCAGCCCTCAAGCGATCA TACTTCACTCAAAATCAGGGCGAAATCCAGTGGATGAGGTCATCAAAAGAAGTGGGGTAC CCCATTATAAATGCCCCATCCAAGACAAAGTTAGAACCCAGTGCTTTCCACTATGTTTTT GAAGGTGTTAAGGAACCAGCTGTACTCACTAAGAATGACCCCAGACTAAAAACAGATTTT GAAGAAGCCATCTTTTCTAAATATGTGGGGAACAAAATTACTGAAGTGGACGAGTACATG AAAGAAGCAGTGGATCACTATGCAGGACAGTTAATGTCACTGGATATCAACACAGAACAG ATGTGCCTGGAGGATGCCATGTACGGCACCGATGGTCTTGAGGCCCTGGATCTTAGCACT AGTGCTGGATATCCTTATGTTGCAATGGGGAAAAAGAAAAGAGACATTCTAGATAAACAG ACCAGAGATACTAAGGAGATGCAGAGACTTTTAGATACCTATGGAATCAATCTACCATTA GTCACGTACGTGAAAGATGAACTCAGGTCAAAGACTAAAGTGGAACAAGGAAAGTCAAGA TTGATTGAAGCTTCCAGCCTTAATGATTCAGTTGCAATGAGAATGGCCTTTGGCAATCTT TACGCAGCTTTCCACAAGAATCCAGGTGTGGTGACAGGATCAGCAGTTGGTTGTGACCCA GATTTGTTTTGGAGTAAGATACCAGTGCTAATGGAAGAAAAACTCTTCGCTTTTGACTAC ACAGGGTATGATGCCTCACTCAGCCCTGCTTGGTTTGAAGCTCTTAAAATGGTGTTAGAA AAAATTGGATTTGGCAGTAGAGTAGACTATATAGACTACCTGAACCACTCTCACCACCTT TACAAAAACAAGACTTATTGTGTCAAAGGCGGCATGCCATCCGGCTGCTCTGGCACCTCA ATTTTCAACTCAATGATTAACAACCTGATCATTAGGACGCTTTTACTGAGAACCTACAAG GGCATAGACTTGGACCATTTAAAAATGATTGCCTATGGTGATGACGTGATAGCTTCCTAC CCCCATGAGGTTGACGCTAGTCTCCTAGCCCAATCAGGAAAAGACTATGGACTAACCATG ACTCCAGCAGATAAATCAGTAACCTTTGAAACAGTCACATGGGAGAATGTAACATTTCTG AAAAGATTTTTCAGAGCAGATGAGAAGTATCCATTCCTGGTGCATCCAGTGATGCCAATG AAAGAAATTCACGAATCAATCAGATGGACCAAGGACCCTAGAAACACACAGGATCACGTA CGCTCGTTGTGCCTATTAGCTTGGCACAACGGTGAAGAAGAATACAATAAATTTTTAGCT AAAATCAGAAGTGTGCCAATCGGAAGAGCTTTATTGCTCCCAGAGTACTCTACATTGTAC CGCCGATGGCTCGACTCATTTTAG
- Chromosome Location
- Not Available
- Locus
- Not Available
- External Identifiers
Resource Link UniProtKB ID Q71LY2 UniProtKB Entry Name Q71LY2_9ENTO GenBank Protein ID 33317929 GenBank Gene ID AF465515 - General References
- Newcombe NG, Andersson P, Johansson ES, Au GG, Lindberg AM, Barry RD, Shafren DR: Cellular receptor interactions of C-cluster human group A coxsackieviruses. J Gen Virol. 2003 Nov;84(Pt 11):3041-50. [Article]