Bacteriorhodopsin
Details
- Name
- Bacteriorhodopsin
- Synonyms
- Not Available
- Gene Name
- Not Available
- Organism
- Nostoc sp. (strain PCC 7120 / UTEX 2576)
- Amino acid sequence
>lcl|BSEQ0012294|Bacteriorhodopsin MNLESLLHWIYVAGMTIGALHFWSLSRNPRGVPQYEYLVAMFIPIWSGLAYMAMAIDQGK VEAAGQIAHYARYIDWMVTTPLLLLSLSWTAMQFIKKDWTLIGFLMSTQIVVITSGLIAD LSERDWVRYLWYICGVCAFLIILWGIWNPLRAKTRTQSSELANLYDKLVTYFTVLWIGYP IVWIIGPSGFGWINQTIDTFLFCLLPFFSKVGFSFLDLHGLRNLNDSRQTTGDRFAENTL QFVENITLFANSRRQQSRRRV
- Number of residues
- 261
- Molecular Weight
- 30190.99
- Theoretical pI
- 9.03
- GO Classification
- Functionsion channel activityComponentsintegral component of membrane
- General Function
- Ion channel activity
- Specific Function
- Not Available
- Pfam Domain Function
- Bac_rhodopsin (PF01036)
- Transmembrane Regions
- 6-25 37-56 76-92 99-117 129-147 168-193 199-218
- Cellular Location
- Not Available
- Gene sequence
>lcl|BSEQ0012295|Bacteriorhodopsin ATGAATTTGGAGAGTCTTTTACACTGGATTTATGTTGCGGGAATGACAATTGGTGCATTG CACTTTTGGTCACTTAGTCGAAATCCGCGCGGTGTTCCCCAGTACGAATACCTTGTGGCG ATGTTTATTCCCATTTGGTCGGGACTAGCCTATATGGCAATGGCAATAGACCAAGGTAAA GTTGAAGCGGCTGGGCAAATTGCCCACTATGCCCGTTATATTGATTGGATGGTGACAACA CCATTATTACTGCTATCTCTTTCTTGGACAGCGATGCAGTTTATCAAAAAAGATTGGACA CTCATTGGTTTTTTGATGAGTACCCAGATAGTTGTAATTACCTCTGGGTTAATCGCAGAT TTATCTGAGCGCGATTGGGTGAGATATCTATGGTATATCTGCGGGGTTTGCGCTTTTCTC ATTATTCTTTGGGGTATTTGGAATCCATTGCGCGCCAAAACCAGAACTCAAAGTTCAGAA CTAGCGAACTTATACGATAAGCTTGTTACTTATTTTACAGTGCTTTGGATAGGCTACCCA ATAGTCTGGATTATTGGCCCTAGTGGTTTTGGCTGGATAAATCAAACTATAGATACATTT TTGTTTTGTCTACTGCCCTTTTTCTCCAAGGTTGGATTTAGTTTTCTGGATTTACACGGC TTACGTAATCTCAATGATTCCCGCCAAACTACTGGCGATCGCTTTGCGGAAAATACTTTA CAGTTTGTAGAAAATATTACATTATTTGCTAACTCACGACGGCAACAATCACGCAGAAGA GTTTGA
- Chromosome Location
- Not Available
- Locus
- Not Available
- External Identifiers
Resource Link UniProtKB ID Q8YSC4 UniProtKB Entry Name Q8YSC4_NOSS1 GenBank Gene ID BA000019 - General References
- Kaneko T, Nakamura Y, Wolk CP, Kuritz T, Sasamoto S, Watanabe A, Iriguchi M, Ishikawa A, Kawashima K, Kimura T, Kishida Y, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakazaki N, Shimpo S, Sugimoto M, Takazawa M, Yamada M, Yasuda M, Tabata S: Complete genomic sequence of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120. DNA Res. 2001 Oct 31;8(5):205-13; 227-53. [Article]
- Vogeley L, Sineshchekov OA, Trivedi VD, Sasaki J, Spudich JL, Luecke H: Anabaena sensory rhodopsin: a photochromic color sensor at 2.0 A. Science. 2004 Nov 19;306(5700):1390-3. Epub 2004 Sep 30. [Article]
- Wang S, Munro RA, Shi L, Kawamura I, Okitsu T, Wada A, Kim SY, Jung KH, Brown LS, Ladizhansky V: Solid-state NMR spectroscopy structure determination of a lipid-embedded heptahelical membrane protein. Nat Methods. 2013 Oct;10(10):1007-12. doi: 10.1038/nmeth.2635. Epub 2013 Sep 8. [Article]