Bacteriorhodopsin

Details

Name
Bacteriorhodopsin
Synonyms
Not Available
Gene Name
Not Available
Organism
Nostoc sp. (strain PCC 7120 / UTEX 2576)
Amino acid sequence
>lcl|BSEQ0012294|Bacteriorhodopsin
MNLESLLHWIYVAGMTIGALHFWSLSRNPRGVPQYEYLVAMFIPIWSGLAYMAMAIDQGK
VEAAGQIAHYARYIDWMVTTPLLLLSLSWTAMQFIKKDWTLIGFLMSTQIVVITSGLIAD
LSERDWVRYLWYICGVCAFLIILWGIWNPLRAKTRTQSSELANLYDKLVTYFTVLWIGYP
IVWIIGPSGFGWINQTIDTFLFCLLPFFSKVGFSFLDLHGLRNLNDSRQTTGDRFAENTL
QFVENITLFANSRRQQSRRRV
Number of residues
261
Molecular Weight
30190.99
Theoretical pI
9.03
GO Classification
Functions
ion channel activity
Components
integral component of membrane
General Function
Ion channel activity
Specific Function
Not Available
Pfam Domain Function
Transmembrane Regions
6-25 37-56 76-92 99-117 129-147 168-193 199-218
Cellular Location
Not Available
Gene sequence
>lcl|BSEQ0012295|Bacteriorhodopsin
ATGAATTTGGAGAGTCTTTTACACTGGATTTATGTTGCGGGAATGACAATTGGTGCATTG
CACTTTTGGTCACTTAGTCGAAATCCGCGCGGTGTTCCCCAGTACGAATACCTTGTGGCG
ATGTTTATTCCCATTTGGTCGGGACTAGCCTATATGGCAATGGCAATAGACCAAGGTAAA
GTTGAAGCGGCTGGGCAAATTGCCCACTATGCCCGTTATATTGATTGGATGGTGACAACA
CCATTATTACTGCTATCTCTTTCTTGGACAGCGATGCAGTTTATCAAAAAAGATTGGACA
CTCATTGGTTTTTTGATGAGTACCCAGATAGTTGTAATTACCTCTGGGTTAATCGCAGAT
TTATCTGAGCGCGATTGGGTGAGATATCTATGGTATATCTGCGGGGTTTGCGCTTTTCTC
ATTATTCTTTGGGGTATTTGGAATCCATTGCGCGCCAAAACCAGAACTCAAAGTTCAGAA
CTAGCGAACTTATACGATAAGCTTGTTACTTATTTTACAGTGCTTTGGATAGGCTACCCA
ATAGTCTGGATTATTGGCCCTAGTGGTTTTGGCTGGATAAATCAAACTATAGATACATTT
TTGTTTTGTCTACTGCCCTTTTTCTCCAAGGTTGGATTTAGTTTTCTGGATTTACACGGC
TTACGTAATCTCAATGATTCCCGCCAAACTACTGGCGATCGCTTTGCGGAAAATACTTTA
CAGTTTGTAGAAAATATTACATTATTTGCTAACTCACGACGGCAACAATCACGCAGAAGA
GTTTGA
Chromosome Location
Not Available
Locus
Not Available
External Identifiers
ResourceLink
UniProtKB IDQ8YSC4
UniProtKB Entry NameQ8YSC4_NOSS1
GenBank Gene IDBA000019
General References
  1. Kaneko T, Nakamura Y, Wolk CP, Kuritz T, Sasamoto S, Watanabe A, Iriguchi M, Ishikawa A, Kawashima K, Kimura T, Kishida Y, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakazaki N, Shimpo S, Sugimoto M, Takazawa M, Yamada M, Yasuda M, Tabata S: Complete genomic sequence of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120. DNA Res. 2001 Oct 31;8(5):205-13; 227-53. [Article]
  2. Vogeley L, Sineshchekov OA, Trivedi VD, Sasaki J, Spudich JL, Luecke H: Anabaena sensory rhodopsin: a photochromic color sensor at 2.0 A. Science. 2004 Nov 19;306(5700):1390-3. Epub 2004 Sep 30. [Article]
  3. Wang S, Munro RA, Shi L, Kawamura I, Okitsu T, Wada A, Kim SY, Jung KH, Brown LS, Ladizhansky V: Solid-state NMR spectroscopy structure determination of a lipid-embedded heptahelical membrane protein. Nat Methods. 2013 Oct;10(10):1007-12. doi: 10.1038/nmeth.2635. Epub 2013 Sep 8. [Article]

Drug Relations

Drug Relations
DrugBank IDNameDrug groupPharmacological action?ActionsDetails
DB04327PhosphatidylethanolamineexperimentalunknownDetails