dTDP-4-dehydrorhamnose 3,5-epimerase
Details
- Name
- dTDP-4-dehydrorhamnose 3,5-epimerase
- Synonyms
- 5.1.3.13
- dTDP-4-keto-6-deoxyglucose 3,5-epimerase
- dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase
- dTDP-L-rhamnose synthase
- Thymidine diphospho-4-keto-rhamnose 3,5-epimerase
- Gene Name
- rmlC
- Organism
- Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
- Amino acid sequence
>lcl|BSEQ0011789|dTDP-4-dehydrorhamnose 3,5-epimerase MKATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSARGVLRG LHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGF VVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQDAPLLSEKDRQGKAFADADCF P
- Number of residues
- 181
- Molecular Weight
- 20766.29
- Theoretical pI
- 6.02
- GO Classification
- FunctionsdTDP-4-dehydrorhamnose 3,5-epimerase activityProcessesdTDP-rhamnose biosynthetic process / extracellular polysaccharide biosynthetic process / lipopolysaccharide biosynthetic process
- General Function
- Dtdp-4-dehydrorhamnose 3,5-epimerase activity
- Specific Function
- Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.
- Pfam Domain Function
- dTDP_sugar_isom (PF00908)
- Transmembrane Regions
- Not Available
- Cellular Location
- Not Available
- Gene sequence
>lcl|BSEQ0011790|dTDP-4-dehydrorhamnose 3,5-epimerase (rmlC) ATGAAAGCGACCCGCCTGGCAATTCCCGACGTCATCCTCTTCGAACCCCGGGTGTTCGGC GACGATCGCGGATTCTTCTTCGAAAGCTACAACCAGCGCGCCTTCGAGGAAGCCTGCGGT CATCCGGTCAGCTTCGTCCAGGACAACCATTCGCGTTCCGCCCGTGGCGTCCTCCGCGGC CTGCACTACCAGATCCGGCAAGCCCAGGGAAAACTGGTGCGCGCCACTCTCGGCGAGGTA TTCGACGTGGCCGTCGACCTGCGTCGCGGCTCGCCGACCTTCGGCCAGTGGGTAGGCGAA CGCCTGAGCGCGGAGAACAAGCGCCAGATGTGGATTCCGGCCGGCTTCGCGCACGGCTTC GTGGTGCTCAGCGAATACGCCGAGTTCCTCTACAAGACCACCGACTTCTGGGCGCCGGAA CACGAACGCTGCATCGTCTGGAACGATCCCGAGCTGAAGATCGACTGGCCGCTGCAGGAT GCCCCCCTGCTTTCGGAGAAGGACCGCCAGGGCAAGGCATTCGCCGACGCCGACTGCTTC CCCTGA
- Chromosome Location
- Not Available
- Locus
- Not Available
- External Identifiers
Resource Link UniProtKB ID Q9HU21 UniProtKB Entry Name RMLC_PSEAE GenBank Gene ID AE004091 - General References
- Stover CK, Pham XQ, Erwin AL, Mizoguchi SD, Warrener P, Hickey MJ, Brinkman FS, Hufnagle WO, Kowalik DJ, Lagrou M, Garber RL, Goltry L, Tolentino E, Westbrock-Wadman S, Yuan Y, Brody LL, Coulter SN, Folger KR, Kas A, Larbig K, Lim R, Smith K, Spencer D, Wong GK, Wu Z, Paulsen IT, Reizer J, Saier MH, Hancock RE, Lory S, Olson MV: Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen. Nature. 2000 Aug 31;406(6799):959-64. [Article]
- Dong C, Major LL, Srikannathasan V, Errey JC, Giraud MF, Lam JS, Graninger M, Messner P, McNeil MR, Field RA, Whitfield C, Naismith JH: RmlC, a C3' and C5' carbohydrate epimerase, appears to operate via an intermediate with an unusual twist boat conformation. J Mol Biol. 2007 Jan 5;365(1):146-59. Epub 2006 Sep 29. [Article]