dTDP-4-dehydrorhamnose 3,5-epimerase

Details

Name
dTDP-4-dehydrorhamnose 3,5-epimerase
Synonyms
  • 5.1.3.13
  • dTDP-4-keto-6-deoxyglucose 3,5-epimerase
  • dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase
  • dTDP-L-rhamnose synthase
  • Thymidine diphospho-4-keto-rhamnose 3,5-epimerase
Gene Name
rmlC
Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Amino acid sequence
>lcl|BSEQ0011789|dTDP-4-dehydrorhamnose 3,5-epimerase
MKATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSARGVLRG
LHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGF
VVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQDAPLLSEKDRQGKAFADADCF
P
Number of residues
181
Molecular Weight
20766.29
Theoretical pI
6.02
GO Classification
Functions
dTDP-4-dehydrorhamnose 3,5-epimerase activity
Processes
dTDP-rhamnose biosynthetic process / extracellular polysaccharide biosynthetic process / lipopolysaccharide biosynthetic process
General Function
Dtdp-4-dehydrorhamnose 3,5-epimerase activity
Specific Function
Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.
Pfam Domain Function
Transmembrane Regions
Not Available
Cellular Location
Not Available
Gene sequence
>lcl|BSEQ0011790|dTDP-4-dehydrorhamnose 3,5-epimerase (rmlC)
ATGAAAGCGACCCGCCTGGCAATTCCCGACGTCATCCTCTTCGAACCCCGGGTGTTCGGC
GACGATCGCGGATTCTTCTTCGAAAGCTACAACCAGCGCGCCTTCGAGGAAGCCTGCGGT
CATCCGGTCAGCTTCGTCCAGGACAACCATTCGCGTTCCGCCCGTGGCGTCCTCCGCGGC
CTGCACTACCAGATCCGGCAAGCCCAGGGAAAACTGGTGCGCGCCACTCTCGGCGAGGTA
TTCGACGTGGCCGTCGACCTGCGTCGCGGCTCGCCGACCTTCGGCCAGTGGGTAGGCGAA
CGCCTGAGCGCGGAGAACAAGCGCCAGATGTGGATTCCGGCCGGCTTCGCGCACGGCTTC
GTGGTGCTCAGCGAATACGCCGAGTTCCTCTACAAGACCACCGACTTCTGGGCGCCGGAA
CACGAACGCTGCATCGTCTGGAACGATCCCGAGCTGAAGATCGACTGGCCGCTGCAGGAT
GCCCCCCTGCTTTCGGAGAAGGACCGCCAGGGCAAGGCATTCGCCGACGCCGACTGCTTC
CCCTGA
Chromosome Location
Not Available
Locus
Not Available
External Identifiers
ResourceLink
UniProtKB IDQ9HU21
UniProtKB Entry NameRMLC_PSEAE
GenBank Gene IDAE004091
General References
  1. Stover CK, Pham XQ, Erwin AL, Mizoguchi SD, Warrener P, Hickey MJ, Brinkman FS, Hufnagle WO, Kowalik DJ, Lagrou M, Garber RL, Goltry L, Tolentino E, Westbrock-Wadman S, Yuan Y, Brody LL, Coulter SN, Folger KR, Kas A, Larbig K, Lim R, Smith K, Spencer D, Wong GK, Wu Z, Paulsen IT, Reizer J, Saier MH, Hancock RE, Lory S, Olson MV: Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen. Nature. 2000 Aug 31;406(6799):959-64. [Article]
  2. Dong C, Major LL, Srikannathasan V, Errey JC, Giraud MF, Lam JS, Graninger M, Messner P, McNeil MR, Field RA, Whitfield C, Naismith JH: RmlC, a C3' and C5' carbohydrate epimerase, appears to operate via an intermediate with an unusual twist boat conformation. J Mol Biol. 2007 Jan 5;365(1):146-59. Epub 2006 Sep 29. [Article]

Drug Relations

Drug Relations
DrugBank IDNameDrug groupPharmacological action?ActionsDetails
DB01694D-tartaric acidexperimentalunknownDetails