5-phenylpentanoic acid

Identification

Generic Name
5-phenylpentanoic acid
DrugBank Accession Number
DB04051
Background

Not Available

Type
Small Molecule
Groups
Experimental
Structure
Weight
Average: 178.2277
Monoisotopic: 178.099379692
Chemical Formula
C11H14O2
Synonyms
  • 5-Phenylvaleric acid
  • Benzenepentanoic-acid
  • Phenylpentanoic acid
  • Phenylvaleric acid
  • δ-phenylvaleric acid
External IDs
  • NSC-65637

Pharmacology

Indication

Not Available

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Pharmacodynamics

Not Available

Mechanism of action
TargetActionsOrganism
UAromatic-amino-acid aminotransferaseNot AvailableParacoccus denitrificans
Absorption

Not Available

Volume of distribution

Not Available

Protein binding

Not Available

Metabolism
Not Available
Route of elimination

Not Available

Half-life

Not Available

Clearance

Not Available

Adverse Effects
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Toxicity

Not Available

Pathways
Not Available
Pharmacogenomic Effects/ADRs
Not Available

Interactions

Drug Interactions
This information should not be interpreted without the help of a healthcare provider. If you believe you are experiencing an interaction, contact a healthcare provider immediately. The absence of an interaction does not necessarily mean no interactions exist.
Not Available
Food Interactions
Not Available

Categories

Drug Categories
Chemical TaxonomyProvided by Classyfire
Description
This compound belongs to the class of organic compounds known as medium-chain fatty acids. These are fatty acids with an aliphatic tail that contains between 4 and 12 carbon atoms.
Kingdom
Organic compounds
Super Class
Lipids and lipid-like molecules
Class
Fatty Acyls
Sub Class
Fatty acids and conjugates
Direct Parent
Medium-chain fatty acids
Alternative Parents
Benzene and substituted derivatives / Monocarboxylic acids and derivatives / Carboxylic acids / Organic oxides / Hydrocarbon derivatives / Carbonyl compounds
Substituents
Aromatic homomonocyclic compound / Benzenoid / Carbonyl group / Carboxylic acid / Carboxylic acid derivative / Hydrocarbon derivative / Medium-chain fatty acid / Monocarboxylic acid or derivatives / Monocyclic benzene moiety / Organic oxide
Molecular Framework
Aromatic homomonocyclic compounds
External Descriptors
monocarboxylic acid, benzenes (CHEBI:40131)
Affected organisms
Not Available

Chemical Identifiers

UNII
XYJ5U8LCQ8
CAS number
2270-20-4
InChI Key
BYHDDXPKOZIZRV-UHFFFAOYSA-N
InChI
InChI=1S/C11H14O2/c12-11(13)9-5-4-8-10-6-2-1-3-7-10/h1-3,6-7H,4-5,8-9H2,(H,12,13)
IUPAC Name
5-phenylpentanoic acid
SMILES
OC(=O)CCCCC1=CC=CC=C1

References

General References
Not Available
Human Metabolome Database
HMDB0002043
PubChem Compound
16757
PubChem Substance
46507339
ChemSpider
15886
ChEBI
40131
ChEMBL
CHEMBL443064
ZINC
ZINC000001692494
PDBe Ligand
5PV
PDB Entries
2ay9 / 4lkm

Clinical Trials

Clinical Trials
PhaseStatusPurposeConditionsCount

Pharmacoeconomics

Manufacturers
Not Available
Packagers
Not Available
Dosage Forms
Not Available
Prices
Not Available
Patents
Not Available

Properties

State
Solid
Experimental Properties
Not Available
Predicted Properties
PropertyValueSource
Water Solubility0.204 mg/mLALOGPS
logP2.81ALOGPS
logP2.94Chemaxon
logS-2.9ALOGPS
pKa (Strongest Acidic)4.94Chemaxon
Physiological Charge-1Chemaxon
Hydrogen Acceptor Count2Chemaxon
Hydrogen Donor Count1Chemaxon
Polar Surface Area37.3 Å2Chemaxon
Rotatable Bond Count5Chemaxon
Refractivity51.17 m3·mol-1Chemaxon
Polarizability20.11 Å3Chemaxon
Number of Rings1Chemaxon
Bioavailability1Chemaxon
Rule of FiveYesChemaxon
Ghose FilterYesChemaxon
Veber's RuleYesChemaxon
MDDR-like RuleNoChemaxon
Predicted ADMET Features
PropertyValueProbability
Human Intestinal Absorption+0.9675
Blood Brain Barrier+0.937
Caco-2 permeable+0.7634
P-glycoprotein substrateNon-substrate0.7155
P-glycoprotein inhibitor INon-inhibitor0.9788
P-glycoprotein inhibitor IINon-inhibitor0.9819
Renal organic cation transporterNon-inhibitor0.8842
CYP450 2C9 substrateNon-substrate0.786
CYP450 2D6 substrateNon-substrate0.92
CYP450 3A4 substrateNon-substrate0.7682
CYP450 1A2 substrateNon-inhibitor0.7568
CYP450 2C9 inhibitorNon-inhibitor0.943
CYP450 2D6 inhibitorNon-inhibitor0.9433
CYP450 2C19 inhibitorNon-inhibitor0.9623
CYP450 3A4 inhibitorNon-inhibitor0.9638
CYP450 inhibitory promiscuityLow CYP Inhibitory Promiscuity0.962
Ames testNon AMES toxic0.9025
CarcinogenicityNon-carcinogens0.8501
BiodegradationReady biodegradable0.8338
Rat acute toxicity1.8893 LD50, mol/kg Not applicable
hERG inhibition (predictor I)Weak inhibitor0.9009
hERG inhibition (predictor II)Non-inhibitor0.9509
ADMET data is predicted using admetSAR, a free tool for evaluating chemical ADMET properties. (23092397)

Spectra

Mass Spec (NIST)
Not Available
Spectra
SpectrumSpectrum TypeSplash Key
Predicted GC-MS Spectrum - GC-MSPredicted GC-MSsplash10-0f6x-8900000000-5296b96690317532ca1e
GC-MS Spectrum - EI-BGC-MSsplash10-0006-9500000000-40d787bf66ca5dda522b
MS/MS Spectrum - Quattro_QQQ 10V, Positive (Annotated)LC-MS/MSsplash10-004i-0900000000-2532a979e5230329e9ba
MS/MS Spectrum - Quattro_QQQ 25V, Positive (Annotated)LC-MS/MSsplash10-0059-9300000000-e7e07895512abecadb47
MS/MS Spectrum - Quattro_QQQ 40V, Positive (Annotated)LC-MS/MSsplash10-0059-9300000000-21f8c2e8f7b5da8e34b8
Predicted MS/MS Spectrum - 10V, Positive (Annotated)Predicted LC-MS/MSsplash10-05mo-5900000000-aeed8250c8975e163043
Predicted MS/MS Spectrum - 10V, Negative (Annotated)Predicted LC-MS/MSsplash10-004i-1900000000-bf5608d0e61b66f310bb
Predicted MS/MS Spectrum - 20V, Negative (Annotated)Predicted LC-MS/MSsplash10-0a4i-4900000000-5f19e476994d9382fbdd
Predicted MS/MS Spectrum - 20V, Positive (Annotated)Predicted LC-MS/MSsplash10-0pbc-9700000000-b811cb858298e74ce0eb
Predicted MS/MS Spectrum - 40V, Negative (Annotated)Predicted LC-MS/MSsplash10-052f-9100000000-94c06db2e2e63febcb9c
Predicted MS/MS Spectrum - 40V, Positive (Annotated)Predicted LC-MS/MSsplash10-0006-9200000000-f152d20ec9fe215106b1
1H NMR Spectrum1D NMRNot Applicable
Predicted 1H NMR Spectrum1D NMRNot Applicable
Predicted 13C NMR Spectrum1D NMRNot Applicable
[1H,13C] 2D NMR Spectrum2D NMRNot Applicable
Chromatographic Properties
Collision Cross Sections (CCS)
AdductCCS Value (Å2)Source typeSource
[M-H]-147.4829124
predicted
DarkChem Lite v0.1.0
[M-H]-147.5145124
predicted
DarkChem Lite v0.1.0
[M-H]-137.19926
predicted
DeepCCS 1.0 (2019)
[M+H]+140.49066
predicted
DeepCCS 1.0 (2019)
[M+Na]+149.88266
predicted
DeepCCS 1.0 (2019)

Targets

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Kind
Protein
Organism
Paracoccus denitrificans
Pharmacological action
Unknown
General Function
Pyridoxal phosphate binding
Specific Function
Shows activities toward both dicarboxylic and aromatic substrates.
Gene Name
tyrB
Uniprot ID
P95468
Uniprot Name
Aromatic-amino-acid aminotransferase
Molecular Weight
42731.635 Da
References
  1. Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
  2. Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]
  3. Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. [Article]

Drug created at June 13, 2005 13:24 / Updated at June 12, 2020 16:52