Cyclin-dependent-like kinase 5

Details

Name
Cyclin-dependent-like kinase 5
Synonyms
  • 2.7.11.1
  • CDKN5
  • Cell division protein kinase 5
  • Serine/threonine-protein kinase PSSALRE
  • Tau protein kinase II catalytic subunit
  • TPKII catalytic subunit
Gene Name
CDK5
Organism
Humans
Amino acid sequence
>lcl|BSEQ0001774|Cyclin-dependent-like kinase 5
MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH
KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR
NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS
TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP
MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP
Number of residues
292
Molecular Weight
33304.125
Theoretical pI
7.75
GO Classification
Functions
acetylcholine receptor activator activity / ATP binding / cyclin-dependent protein serine/threonine kinase activity / ErbB-2 class receptor binding / ErbB-3 class receptor binding / kinase activity / protein kinase activity / protein serine/threonine kinase activity / tau-protein kinase activity
Processes
axon extension / axon guidance / behavioral response to cocaine / blood coagulation / calcium ion import / cell cycle / cell division / cell proliferation / cell-matrix adhesion / central nervous system neuron development / cerebellar cortex formation / corpus callosum development / cortical actin cytoskeleton organization / dendrite morphogenesis / excitatory postsynaptic potential / hippocampus development / intracellular protein transport / layer formation in cerebral cortex / motor neuron axon guidance / negative regulation of axon extension / negative regulation of cell cycle / negative regulation of neuron death / negative regulation of protein export from nucleus / negative regulation of protein ubiquitination / negative regulation of proteolysis / negative regulation of synaptic plasticity / negative regulation of transcription, DNA-templated / neuron apoptotic process / neuron differentiation / neuron migration / neuron projection development / nucleocytoplasmic transport / oligodendrocyte differentiation / peptidyl-serine phosphorylation / peptidyl-threonine phosphorylation / phosphorylation / positive regulation of actin cytoskeleton reorganization / positive regulation of calcium ion-dependent exocytosis / positive regulation of neuron apoptotic process / positive regulation of protein binding / positive regulation of protein kinase activity / positive regulation of protein targeting to membrane / protein autophosphorylation / protein localization to synapse / receptor catabolic process / receptor clustering / regulated secretory pathway / regulation of apoptotic process / regulation of cell cycle arrest / regulation of cell migration / regulation of dendritic spine morphogenesis / regulation of synaptic plasticity / regulation of synaptic vesicle recycling / rhythmic process / Schwann cell development / sensory perception of pain / serine phosphorylation of STAT3 protein / skeletal muscle tissue development / synapse assembly / synaptic transmission / synaptic transmission, dopaminergic / synaptic transmission, glutamatergic / synaptic vesicle endocytosis / synaptic vesicle exocytosis / visual learning
Components
axon / cell junction / cyclin-dependent protein kinase 5 holoenzyme complex / cytoplasm / cytoskeleton / cytosol / dendrite / filopodium / growth cone / lamellipodium / membrane / neuromuscular junction / neuronal cell body / nucleus / perikaryon / plasma membrane / postsynaptic density / postsynaptic membrane
General Function
Tau-protein kinase activity
Specific Function
Proline-directed serine/threonine-protein kinase essential for neuronal cell cycle arrest and differentiation and may be involved in apoptotic cell death in neuronal diseases by triggering abortive cell cycle re-entry. Interacts with D1 and D3-type G1 cyclins. Phosphorylates SRC, NOS3, VIM/vimentin, p35/CDK5R1, MEF2A, SIPA1L1, SH3GLB1, PXN, PAK1, MCAM/MUC18, SEPT5, SYN1, DNM1, AMPH, SYNJ1, CDK16, RAC1, RHOA, CDC42, TONEBP/NFAT5, MAPT/TAU, MAP1B, histone H1, p53/TP53, HDAC1, APEX1, PTK2/FAK1, huntingtin/HTT, ATM, MAP2, NEFH and NEFM. Regulates several neuronal development and physiological processes including neuronal survival, migration and differentiation, axonal and neurite growth, synaptogenesis, oligodendrocyte differentiation, synaptic plasticity and neurotransmission, by phosphorylating key proteins. Activated by interaction with CDK5R1 (p35) and CDK5R2 (p39), especially in post-mitotic neurons, and promotes CDK5R1 (p35) expression in an autostimulation loop. Phosphorylates many downstream substrates such as Rho and Ras family small GTPases (e.g. PAK1, RAC1, RHOA, CDC42) or microtubule-binding proteins (e.g. MAPT/TAU, MAP2, MAP1B), and modulates actin dynamics to regulate neurite growth and/or spine morphogenesis. Phosphorylates also exocytosis associated proteins such as MCAM/MUC18, SEPT5, SYN1, and CDK16/PCTAIRE1 as well as endocytosis associated proteins such as DNM1, AMPH and SYNJ1 at synaptic terminals. In the mature central nervous system (CNS), regulates neurotransmitter movements by phosphorylating substrates associated with neurotransmitter release and synapse plasticity; synaptic vesicle exocytosis, vesicles fusion with the presynaptic membrane, and endocytosis. Promotes cell survival by activating anti-apoptotic proteins BCL2 and STAT3, and negatively regulating of JNK3/MAPK10 activity. Phosphorylation of p53/TP53 in response to genotoxic and oxidative stresses enhances its stabilization by preventing ubiquitin ligase-mediated proteasomal degradation, and induces transactivation of p53/TP53 target genes, thus regulating apoptosis. Phosphorylation of p35/CDK5R1 enhances its stabilization by preventing calpain-mediated proteolysis producing p25/CDK5R1 and avoiding ubiquitin ligase-mediated proteasomal degradation. During aberrant cell-cycle activity and DNA damage, p25/CDK5 activity elicits cell-cycle activity and double-strand DNA breaks that precedes neuronal death by deregulating HDAC1. DNA damage triggered phosphorylation of huntingtin/HTT in nuclei of neurons protects neurons against polyglutamine expansion as well as DNA damage mediated toxicity. Phosphorylation of PXN reduces its interaction with PTK2/FAK1 in matrix-cell focal adhesions (MCFA) during oligodendrocytes (OLs) differentiation. Negative regulator of Wnt/beta-catenin signaling pathway. Activator of the GAIT (IFN-gamma-activated inhibitor of translation) pathway, which suppresses expression of a post-transcriptional regulon of proinflammatory genes in myeloid cells; phosphorylates the linker domain of glutamyl-prolyl tRNA synthetase (EPRS) in a IFN-gamma-dependent manner, the initial event in assembly of the GAIT complex. Phosphorylation of SH3GLB1 is required for autophagy induction in starved neurons. Phosphorylation of TONEBP/NFAT5 in response to osmotic stress mediates its rapid nuclear localization. MEF2 is inactivated by phosphorylation in nucleus in response to neurotoxin, thus leading to neuronal apoptosis. APEX1 AP-endodeoxyribonuclease is repressed by phosphorylation, resulting in accumulation of DNA damage and contributing to neuronal death. NOS3 phosphorylation down regulates NOS3-derived nitrite (NO) levels. SRC phosphorylation mediates its ubiquitin-dependent degradation and thus leads to cytoskeletal reorganization. May regulate endothelial cell migration and angiogenesis via the modulation of lamellipodia formation. Involved in dendritic spine morphogenesis by mediating the EFNA1-EPHA4 signaling. The complex p35/CDK5 participates in the regulation of the circadian clock by modulating the function of CLOCK protein: phosphorylates CLOCK at 'Thr-451' and 'Thr-461' and regulates the transcriptional activity of the CLOCK-ARNTL/BMAL1 heterodimer in association with altered stability and subcellular distribution.
Pfam Domain Function
Transmembrane Regions
Not Available
Cellular Location
Cytoplasm
Gene sequence
>lcl|BSEQ0020492|Cyclin-dependent-like kinase 5 (CDK5)
ATGCAGAAATACGAGAAACTGGAAAAGATTGGGGAAGGCACCTACGGAACTGTGTTCAAG
GCCAAAAACCGGGAGACTCATGAGATCGTGGCTCTGAAACGGGTGAGGCTGGATGACGAT
GATGAGGGTGTGCCGAGTTCCGCCCTCCGGGAGATCTGCCTACTCAAGGAGCTGAAGCAC
AAGAACATCGTCAGGCTTCATGACGTCCTGCACAGCGACAAGAAGCTGACTTTGGTTTTT
GAATTCTGTGACCAGGACCTGAAGAAGTATTTTGACAGTTGCAATGGTGACCTCGATCCT
GAGATTGTAAAGAATGGGGAGCTGAAATTGGCTGATTTTGGCCTGGCTCGAGCCTTTGGG
ATTCCCGTCCGCTGTTACTCAGCTGAGGTGGTCACACTGTGGTACCGCCCACCGGATGTC
CTCTTTGGGGCCAAGCTGTACTCCACGTCCATCGACATGTGGTCAGCCGGCTGCATCTTT
GCAGAGCTGGCCAATGCTGGGCGGCCTCTTTTTCCCGGCAATGATGTCGATGACCAGTTG
AAGAGGATCTTCCGACTGCTGGGGACGCCCACCGAGGAGCAGTGGCCCTCTATGACCAAG
CTGCCAGACTATAAGCCCTATCCGATGTACCCGGCCACAACATCCCTGGTGAACGTCGTG
CCCAAACTCAATGCCACAGGGAGGGATCTGCTGCAGAACCTTCTGAAGTGTAACCCTGTC
CAGCGTATCTCAGCAGAAGAGGCCCTGCAGCACCCCTACTTCTCCGACTTCTGTCCGCCC
TAG
Chromosome Location
7
Locus
7q36
External Identifiers
ResourceLink
UniProtKB IDQ00535
UniProtKB Entry NameCDK5_HUMAN
GenBank Protein ID36621
GenBank Gene IDX66364
GenAtlas IDCDK5
HGNC IDHGNC:1774
General References
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Drug Relations

Drug Relations
DrugBank IDNameDrug groupPharmacological action?ActionsDetails
DB04014AlsterpaulloneexperimentalunknownDetails
DB03496Alvocidibexperimental, investigationalunknownDetails
DB02950HymenialdisineexperimentalunknowninhibitorDetails
DB02052Indirubin-3'-monoximeexperimentalunknowninhibitorDetails
DB02116OlomoucineexperimentalunknowninhibitorDetails
DB03428SU9516experimentalunknowninhibitorDetails
DB073646-PHENYL[5H]PYRROLO[2,3-B]PYRAZINEexperimentalunknownDetails
DB15442Trilaciclibapproved, investigationalnoinhibitorDetails