Outer membrane porin, OprD family
Details
- Name
- Outer membrane porin, OprD family
- Synonyms
- Not Available
- Gene Name
- Not Available
- Organism
- Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
- Amino acid sequence
>lcl|BSEQ0012912|Outer membrane porin, OprD family MKPSTPPSYLLPSLLALALSSTALPALAAESGFLEDAQANLTLRNFYFNRNFTNPTKAQG KAEEWTQSFILDAKSGFTQGTVGFGMDVLGLYSLKLDGGKGTGGTQLLPLDHDGRPADNF GRLGVAFKARLSQTEVKVGEWMPVLPILRSDDGRSLPQTFRGGQITSKEIAGLTLYGGQF RANSPRDDSSMSDMSMFGKAAFTSDRFNFQGAEYAFNDKRTQIALWNAQLKDIYSQQFIN LIHSQPLGDWTLGANLGFFYGKEDGSARAGDMENRTWSGLFSAKYGGNTFYVGLQKLTGD SAWMRVNGTSGGTLANDSYNASYDNAKEKSWQVRHDYNFAALGVPGLTLMNRYISGSNVH TATVSDGKEWGRESEVAYTVQSGTLKNLNLKWRNSTMRRDFSNNEFDENRLIISYPLSLL
- Number of residues
- 420
- Molecular Weight
- 46225.315
- Theoretical pI
- 8.57
- GO Classification
- Functionsporin activityComponentsintegral component of membrane
- General Function
- Porin activity
- Specific Function
- Not Available
- Pfam Domain Function
- OprD (PF03573)
- Transmembrane Regions
- Not Available
- Cellular Location
- Not Available
- Gene sequence
>lcl|BSEQ0012913|Outer membrane porin, OprD family ATGAAGCCAAGCACCCCGCCGTCCTACCTTCTGCCCAGCCTCCTGGCCCTGGCGCTGAGC AGCACCGCCCTGCCGGCACTGGCCGCAGAGTCGGGCTTTCTCGAAGATGCCCAGGCCAAC CTGACCCTGCGCAACTTCTATTTCAACCGCAACTTCACCAACCCGACCAAGGCCCAGGGC AAGGCCGAGGAATGGACCCAGAGCTTCATCCTCGATGCAAAGTCCGGCTTCACCCAGGGC ACCGTCGGTTTCGGCATGGACGTGCTGGGCCTCTACTCGCTGAAACTCGACGGCGGCAAG GGCACTGGCGGCACCCAACTGCTGCCCCTGGATCACGACGGCCGCCCGGCGGACAACTTC GGACGCCTGGGAGTAGCTTTCAAGGCGCGACTGTCTCAGACCGAGGTCAAGGTCGGCGAA TGGATGCCAGTGCTGCCGATCCTGCGCTCCGACGACGGCCGCTCGCTGCCACAGACCTTT CGCGGCGGCCAGATCACCTCGAAGGAAATTGCCGGCCTGACCCTCTATGGCGGCCAGTTC CGCGCCAACAGCCCGCGTGACGACAGCAGCATGAGTGACATGAGCATGTTCGGCAAAGCG GCCTTCACCTCCGACCGTTTCAACTTCCAGGGCGCCGAATATGCCTTCAACGACAAGCGC ACCCAGATCGCCCTGTGGAATGCCCAGCTCAAGGACATCTACAGCCAGCAGTTCATCAAC CTGATCCACAGCCAACCCCTGGGCGACTGGACCCTGGGCGCCAACCTGGGCTTCTTCTAT GGCAAGGAAGACGGCAGCGCCCGCGCCGGCGACATGGAGAACCGCACCTGGTCCGGCCTG TTCTCGGCCAAATATGGCGGCAACACCTTCTATGTGGGCCTGCAGAAGCTCACTGGCGAC AGCGCCTGGATGCGGGTCAATGGCACCAGCGGCGGCACCCTGGCCAACGACAGCTACAAC GCCAGCTACGACAACGCCAAGGAGAAGTCCTGGCAGGTGCGCCATGACTACAATTTCGCC GCGCTGGGCGTTCCCGGCCTGACCCTGATGAACCGCTACATCAGCGGCAGCAACGTGCAC ACCGCCACCGTCAGCGACGGCAAGGAATGGGGCCGGGAAAGCGAAGTGGCCTACACGGTC CAGAGCGGCACACTGAAGAACCTCAACCTGAAGTGGCGCAACTCCACCATGCGCCGGGAC TTCAGCAACAACGAGTTCGACGAGAACCGCCTGATCATCAGCTATCCCCTCAGCCTGCTG TAA
- Chromosome Location
- Not Available
- Locus
- Not Available
- External Identifiers
Resource Link UniProtKB ID Q4KH25 UniProtKB Entry Name Q4KH25_PSEF5 GenBank Protein ID 68347813 GenBank Gene ID CP000076 - General References
- Paulsen IT, Press CM, Ravel J, Kobayashi DY, Myers GS, Mavrodi DV, DeBoy RT, Seshadri R, Ren Q, Madupu R, Dodson RJ, Durkin AS, Brinkac LM, Daugherty SC, Sullivan SA, Rosovitz MJ, Gwinn ML, Zhou L, Schneider DJ, Cartinhour SW, Nelson WC, Weidman J, Watkins K, Tran K, Khouri H, Pierson EA, Pierson LS 3rd, Thomashow LS, Loper JE: Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5. Nat Biotechnol. 2005 Jul;23(7):873-8. Epub 2005 Jun 26. [Article]
- Sampathkumar P, Lu F, Zhao X, Li Z, Gilmore J, Bain K, Rutter ME, Gheyi T, Schwinn KD, Bonanno JB, Pieper U, Fajardo JE, Fiser A, Almo SC, Swaminathan S, Chance MR, Baker D, Atwell S, Thompson DA, Emtage JS, Wasserman SR, Sali A, Sauder JM, Burley SK: Structure of a putative BenF-like porin from Pseudomonas fluorescens Pf-5 at 2.6 A resolution. Proteins. 2010 Nov 1;78(14):3056-62. doi: 10.1002/prot.22829. [Article]