Peptide deformylase 2

Details

Name
Peptide deformylase 2
Synonyms
  • 3.5.1.88
  • PDF 2
  • Polypeptide deformylase 2
Gene Name
def2
Organism
Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
Amino acid sequence
>lcl|BSEQ0012702|Peptide deformylase 2
MLTMKDVIREGDPILRNVAEEVSLPASEEDTTTLKEMIEFVINSQDPEMAEKYSLRPGIG
LAAPQIGVSKKMIAVHVTDADGTLYSHALFNPKIISHSVERTYLQGGEGCLSVDREVPGY
VPRYTRITVKATSINGEEVKLRLKGLPAIVFQHEIDHLNGVMFYDHINKENPFAAPDDSK
PLER
Number of residues
184
Molecular Weight
20474.205
Theoretical pI
5.1
GO Classification
Functions
iron ion binding / peptide deformylase activity
Processes
translation
General Function
Peptide deformylase activity
Specific Function
Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
Pfam Domain Function
Transmembrane Regions
Not Available
Cellular Location
Cytoplasmic
Gene sequence
>lcl|BSEQ0012703|Peptide deformylase 2 (def2)
ATGCTTACAATGAAAGATGTTATTCGCGAAGGAGATCCTATTTTGCGCAACGTTGCAGAA
GAGGTGTCCTTACCGGCAAGCGAAGAAGATACAACTACCTTAAAAGAAATGATTGAATTC
GTAATAAATAGCCAAGATCCTGAAATGGCTGAAAAATATAGTTTACGCCCTGGAATCGGA
TTAGCGGCTCCGCAAATCGGTGTTTCAAAAAAAATGATTGCAGTTCATGTAACCGATGCG
GATGGTACATTATATAGCCATGCATTATTCAATCCAAAAATCATTAGCCATTCTGTTGAA
CGTACATATTTACAGGGTGGTGAAGGCTGTCTATCTGTAGACCGCGAAGTACCTGGTTAT
GTTCCTCGTTATACAAGAATTACAGTAAAAGCAACTTCTATTAACGGAGAAGAAGTAAAA
TTACGTTTAAAAGGTTTACCAGCAATCGTATTTCAGCACGAGATTGACCATTTAAATGGC
GTTATGTTCTATGACCATATCAATAAAGAAAATCCTTTTGCCGCTCCTGATGATTCCAAA
CCTCTAGAGCGATAA
Chromosome Location
Not Available
Locus
Not Available
External Identifiers
ResourceLink
UniProtKB IDQ819K2
UniProtKB Entry NameDEF2_BACCR
GenBank Protein ID29893819
GenBank Gene IDAE016877
General References
  1. Ivanova N, Sorokin A, Anderson I, Galleron N, Candelon B, Kapatral V, Bhattacharyya A, Reznik G, Mikhailova N, Lapidus A, Chu L, Mazur M, Goltsman E, Larsen N, D'Souza M, Walunas T, Grechkin Y, Pusch G, Haselkorn R, Fonstein M, Ehrlich SD, Overbeek R, Kyrpides N: Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis. Nature. 2003 May 1;423(6935):87-91. [Article]

Drug Relations

Drug Relations
DrugBank IDNameDrug groupPharmacological action?ActionsDetails
DB043102-[(Formyl-Hydroxy-Amino)-Methyl]-Heptanoic Acid [1-(2-Hydroxymethyl-Pyrrolidine-1-Carbonyl)-2-Methyl-Propyl]-AmideexperimentalunknownDetails