4-(Hydroxymethyl)Benzamidine

Identification

Generic Name
4-(Hydroxymethyl)Benzamidine
DrugBank Accession Number
DB02585
Background

Not Available

Type
Small Molecule
Groups
Experimental
Structure
Weight
Average: 150.1778
Monoisotopic: 150.079312952
Chemical Formula
C8H10N2O
Synonyms
Not Available

Pharmacology

Indication

Not Available

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Pharmacodynamics

Not Available

Mechanism of action
TargetActionsOrganism
UTrypsin-3Not AvailableHumans
Absorption

Not Available

Volume of distribution

Not Available

Protein binding

Not Available

Metabolism
Not Available
Route of elimination

Not Available

Half-life

Not Available

Clearance

Not Available

Adverse Effects
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Toxicity

Not Available

Pathways
Not Available
Pharmacogenomic Effects/ADRs
Not Available

Interactions

Drug Interactions
This information should not be interpreted without the help of a healthcare provider. If you believe you are experiencing an interaction, contact a healthcare provider immediately. The absence of an interaction does not necessarily mean no interactions exist.
Not Available
Food Interactions
Not Available

Categories

Drug Categories
Not Available
Chemical TaxonomyProvided by Classyfire
Description
This compound belongs to the class of organic compounds known as benzyl alcohols. These are organic compounds containing the phenylmethanol substructure.
Kingdom
Organic compounds
Super Class
Benzenoids
Class
Benzene and substituted derivatives
Sub Class
Benzyl alcohols
Direct Parent
Benzyl alcohols
Alternative Parents
Carboximidamides / Carboxamidines / Primary alcohols / Organopnictogen compounds / Hydrocarbon derivatives / Aromatic alcohols
Substituents
Alcohol / Amidine / Aromatic alcohol / Aromatic homomonocyclic compound / Benzyl alcohol / Carboximidamide / Carboxylic acid amidine / Hydrocarbon derivative / Organic nitrogen compound / Organic oxygen compound
Molecular Framework
Aromatic homomonocyclic compounds
External Descriptors
Not Available
Affected organisms
Not Available

Chemical Identifiers

UNII
E678E6SN42
CAS number
Not Available
InChI Key
WHMKAFNJMLEDSN-UHFFFAOYSA-N
InChI
InChI=1S/C8H10N2O/c9-8(10)7-3-1-6(5-11)2-4-7/h1-4,11H,5H2,(H3,9,10)
IUPAC Name
4-(hydroxymethyl)benzene-1-carboximidamide
SMILES
NC(=N)C1=CC=C(CO)C=C1

References

General References
Not Available
PubChem Compound
448513
PubChem Substance
46506913
ChemSpider
395287
BindingDB
50153443
ChEMBL
CHEMBL184048
ZINC
ZINC000006535656
PDBe Ligand
4BZ
PDB Entries
1s6h / 3mp8

Clinical Trials

Clinical Trials
PhaseStatusPurposeConditionsCount

Pharmacoeconomics

Manufacturers
Not Available
Packagers
Not Available
Dosage Forms
Not Available
Prices
Not Available
Patents
Not Available

Properties

State
Solid
Experimental Properties
Not Available
Predicted Properties
PropertyValueSource
Water Solubility1.18 mg/mLALOGPS
logP-0.18ALOGPS
logP0.13Chemaxon
logS-2.1ALOGPS
pKa (Strongest Acidic)14.97Chemaxon
pKa (Strongest Basic)11.47Chemaxon
Physiological Charge1Chemaxon
Hydrogen Acceptor Count3Chemaxon
Hydrogen Donor Count3Chemaxon
Polar Surface Area70.1 Å2Chemaxon
Rotatable Bond Count2Chemaxon
Refractivity54.55 m3·mol-1Chemaxon
Polarizability15.95 Å3Chemaxon
Number of Rings1Chemaxon
Bioavailability1Chemaxon
Rule of FiveYesChemaxon
Ghose FilterNoChemaxon
Veber's RuleNoChemaxon
MDDR-like RuleNoChemaxon
Predicted ADMET Features
PropertyValueProbability
Human Intestinal Absorption+0.9132
Blood Brain Barrier+0.889
Caco-2 permeable-0.6124
P-glycoprotein substrateNon-substrate0.7425
P-glycoprotein inhibitor INon-inhibitor0.988
P-glycoprotein inhibitor IINon-inhibitor0.9584
Renal organic cation transporterNon-inhibitor0.6926
CYP450 2C9 substrateNon-substrate0.7538
CYP450 2D6 substrateNon-substrate0.7453
CYP450 3A4 substrateNon-substrate0.8756
CYP450 1A2 substrateNon-inhibitor0.8912
CYP450 2C9 inhibitorNon-inhibitor0.9157
CYP450 2D6 inhibitorNon-inhibitor0.9102
CYP450 2C19 inhibitorNon-inhibitor0.9634
CYP450 3A4 inhibitorNon-inhibitor0.8584
CYP450 inhibitory promiscuityLow CYP Inhibitory Promiscuity0.9666
Ames testNon AMES toxic0.7307
CarcinogenicityNon-carcinogens0.686
BiodegradationNot ready biodegradable0.7377
Rat acute toxicity2.2087 LD50, mol/kg Not applicable
hERG inhibition (predictor I)Weak inhibitor0.9789
hERG inhibition (predictor II)Non-inhibitor0.9643
ADMET data is predicted using admetSAR, a free tool for evaluating chemical ADMET properties. (23092397)

Spectra

Mass Spec (NIST)
Not Available
Spectra
SpectrumSpectrum TypeSplash Key
Predicted GC-MS Spectrum - GC-MSPredicted GC-MSsplash10-0ff0-1900000000-8185dd582e6dc7e82c0f
Predicted MS/MS Spectrum - 10V, Positive (Annotated)Predicted LC-MS/MSsplash10-0ue9-0900000000-c5c5ea55ae47cdee2bd2
Predicted MS/MS Spectrum - 10V, Negative (Annotated)Predicted LC-MS/MSsplash10-0002-0900000000-0614cc5d02cbc608be60
Predicted MS/MS Spectrum - 20V, Positive (Annotated)Predicted LC-MS/MSsplash10-0uyl-3900000000-5d18719f1f0f053cf5cd
Predicted MS/MS Spectrum - 20V, Negative (Annotated)Predicted LC-MS/MSsplash10-0007-9400000000-cf84a74b3efba23a18b3
Predicted MS/MS Spectrum - 40V, Positive (Annotated)Predicted LC-MS/MSsplash10-0gbc-2900000000-765b6f762e8b46569d4e
Predicted MS/MS Spectrum - 40V, Negative (Annotated)Predicted LC-MS/MSsplash10-0006-9000000000-4b616d38eb186bac8051
Predicted 1H NMR Spectrum1D NMRNot Applicable
Predicted 13C NMR Spectrum1D NMRNot Applicable
Chromatographic Properties
Collision Cross Sections (CCS)
AdductCCS Value (Å2)Source typeSource
[M-H]-136.1216813
predicted
DarkChem Lite v0.1.0
[M-H]-135.6917
predicted
DeepCCS 1.0 (2019)
[M+H]+136.6940813
predicted
DarkChem Lite v0.1.0
[M+H]+139.51903
predicted
DeepCCS 1.0 (2019)
[M+Na]+136.0972813
predicted
DarkChem Lite v0.1.0
[M+Na]+148.80397
predicted
DeepCCS 1.0 (2019)

Targets

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Kind
Protein
Organism
Humans
Pharmacological action
Unknown
General Function
Serine-type peptidase activity
Specific Function
Digestive protease specialized for the degradation of trypsin inhibitors. In the ileum, may be involved in defensin processing, including DEFA5.
Gene Name
PRSS3
Uniprot ID
P35030
Uniprot Name
Trypsin-3
Molecular Weight
32528.565 Da
References
  1. Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [Article]
  2. Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. [Article]
  3. Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. [Article]

Drug created at June 13, 2005 13:24 / Updated at August 01, 2020 13:43