NAV

(R)-1-(4-(4-(hydroxymethyl)-1,3,2-dioxaborolan-2-yl)benzyl)guanidine

Identification

Generic Name
(R)-1-(4-(4-(hydroxymethyl)-1,3,2-dioxaborolan-2-yl)benzyl)guanidine
DrugBank Accession Number
DB07887
Background

Not Available

Type
Small Molecule
Groups
Experimental
Structure
Similar Structures
Weight
Average: 249.074
Monoisotopic: 249.128471859
Chemical Formula
C11H16BN3O3
Synonyms
Not Available
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Pharmacology

Indication

Not Available

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Pharmacodynamics

Not Available

Mechanism of action
TargetActionsOrganism
UCoagulation factor XINot AvailableHumans
Absorption

Not Available

Volume of distribution

Not Available

Protein binding

Not Available

Metabolism
Not Available
Route of elimination

Not Available

Half-life

Not Available

Clearance

Not Available

Adverse Effects
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Toxicity

Not Available

Pathways
Not Available
Pharmacogenomic Effects/ADRs
Not Available

Interactions

Drug Interactions
This information should not be interpreted without the help of a healthcare provider. If you believe you are experiencing an interaction, contact a healthcare provider immediately. The absence of an interaction does not necessarily mean no interactions exist.
Not Available
Food Interactions
Not Available

Categories

Drug Categories
Not Available
Chemical TaxonomyProvided by Classyfire
Description
This compound belongs to the class of organic compounds known as benzene and substituted derivatives. These are aromatic compounds containing one monocyclic ring system consisting of benzene.
Kingdom
Organic compounds
Super Class
Benzenoids
Class
Benzene and substituted derivatives
Sub Class
Not Available
Direct Parent
Benzene and substituted derivatives
Alternative Parents
Dioxaborolanes / Boronic acid esters / Guanidines / Propargyl-type 1,3-dipolar organic compounds / Oxacyclic compounds / Organic metalloid salts / Carboximidamides / Primary alcohols / Organopnictogen compounds / Organoboron compounds
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Substituents
1,3,2-dioxaborolane / Alcohol / Aromatic heteromonocyclic compound / Boronic acid derivative / Boronic acid ester / Carboximidamide / Guanidine / Hydrocarbon derivative / Monocyclic benzene moiety / Organic 1,3-dipolar compound
show 12 more
Molecular Framework
Aromatic heteromonocyclic compounds
External Descriptors
Not Available
Affected organisms
Not Available

Chemical Identifiers

UNII
Not Available
CAS number
Not Available
InChI Key
IIZOWFNBOXPJES-SNVBAGLBSA-N
InChI
InChI=1S/C11H16BN3O3/c13-11(14)15-5-8-1-3-9(4-2-8)12-17-7-10(6-16)18-12/h1-4,10,16H,5-7H2,(H4,13,14,15)/t10-/m1/s1
IUPAC Name
N''-({4-[(4R)-4-(hydroxymethyl)-1,3,2-dioxaborolan-2-yl]phenyl}methyl)guanidine
SMILES
[H]N([H])C(=NCC1=CC=C(C=C1)B1OC[C@@H](CO)O1)N([H])[H]

References

General References
Not Available
PubChem Compound
6857719
PubChem Substance
99444358
ChemSpider
5257051
ZINC
ZINC000169748505
PDBe Ligand
HDB
PDB Entries
1zmj

Clinical Trials

Clinical Trials
PhaseStatusPurposeConditionsCount

Pharmacoeconomics

Manufacturers
Not Available
Packagers
Not Available
Dosage Forms
Not Available
Prices
Not Available
Patents
Not Available

Properties

State
Solid
Experimental Properties
Not Available
Predicted Properties
PropertyValueSource
Water Solubility0.568 mg/mLALOGPS
logP0.27ALOGPS
logP1.43Chemaxon
logS-2.6ALOGPS
pKa (Strongest Acidic)14.65Chemaxon
pKa (Strongest Basic)11.36Chemaxon
Physiological Charge1Chemaxon
Hydrogen Acceptor Count6Chemaxon
Hydrogen Donor Count3Chemaxon
Polar Surface Area103.09 Å2Chemaxon
Rotatable Bond Count4Chemaxon
Refractivity62.46 m3·mol-1Chemaxon
Polarizability27.48 Å3Chemaxon
Number of Rings2Chemaxon
Bioavailability1Chemaxon
Rule of FiveYesChemaxon
Ghose FilterYesChemaxon
Veber's RuleNoChemaxon
MDDR-like RuleNoChemaxon
Predicted ADMET Features
PropertyValueProbability
Human Intestinal Absorption+0.9913
Blood Brain Barrier+0.8791
Caco-2 permeable-0.5882
P-glycoprotein substrateNon-substrate0.6513
P-glycoprotein inhibitor INon-inhibitor0.9378
P-glycoprotein inhibitor IINon-inhibitor0.9536
Renal organic cation transporterNon-inhibitor0.6591
CYP450 2C9 substrateNon-substrate0.8265
CYP450 2D6 substrateNon-substrate0.7369
CYP450 3A4 substrateNon-substrate0.7744
CYP450 1A2 substrateNon-inhibitor0.7448
CYP450 2C9 inhibitorNon-inhibitor0.8248
CYP450 2D6 inhibitorNon-inhibitor0.8766
CYP450 2C19 inhibitorNon-inhibitor0.7753
CYP450 3A4 inhibitorNon-inhibitor0.9473
CYP450 inhibitory promiscuityLow CYP Inhibitory Promiscuity0.9002
Ames testAMES toxic0.5342
CarcinogenicityNon-carcinogens0.802
BiodegradationNot ready biodegradable0.9617
Rat acute toxicity2.3965 LD50, mol/kg Not applicable
hERG inhibition (predictor I)Weak inhibitor0.9483
hERG inhibition (predictor II)Non-inhibitor0.9232
ADMET data is predicted using admetSAR, a free tool for evaluating chemical ADMET properties. (23092397)

Spectra

Mass Spec (NIST)
Not Available
Spectra
SpectrumSpectrum TypeSplash Key
Predicted GC-MS Spectrum - GC-MSPredicted GC-MSsplash10-03kc-3930000000-f3aed6dc7acab368b2f6
Predicted MS/MS Spectrum - 10V, Positive (Annotated)Predicted LC-MS/MSsplash10-0udi-0090000000-09d94baf3c83f6e61728
Predicted MS/MS Spectrum - 10V, Negative (Annotated)Predicted LC-MS/MSsplash10-053s-0690000000-a73af781467f3cb7bc64
Predicted MS/MS Spectrum - 20V, Positive (Annotated)Predicted LC-MS/MSsplash10-0fai-0790000000-370029e19d54bd377b37
Predicted MS/MS Spectrum - 20V, Negative (Annotated)Predicted LC-MS/MSsplash10-006x-9110000000-1bed35f8333acca72d6f
Predicted MS/MS Spectrum - 40V, Positive (Annotated)Predicted LC-MS/MSsplash10-052f-5900000000-35d7982acc11b205d492
Predicted MS/MS Spectrum - 40V, Negative (Annotated)Predicted LC-MS/MSsplash10-0a4l-9200000000-dbb93de24a5c9e9494aa
Chromatographic Properties
Collision Cross Sections (CCS)
Not Available

Targets

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Details1. Coagulation factor XI
Kind
Protein
Organism
Humans
Pharmacological action
Unknown
General Function
Serine-type endopeptidase activity
Specific Function
Factor XI triggers the middle phase of the intrinsic pathway of blood coagulation by activating factor IX.
Gene Name
F11
Uniprot ID
P03951
Uniprot Name
Coagulation factor XI
Molecular Weight
70108.56 Da
References
  1. Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. [Article]

Drug created at September 15, 2010 21:26 / Updated at June 12, 2020 16:52