Metabolite 3'-Aminothymidine

Name
3'-Aminothymidine
Description
Not Available
Structure
Synonyms
3'-Amino-3'-deoxythymidine / 3’-amino-3’-deoxythimidine
UNII
7W21M0C25B
CAS number
52450-18-7
Weight
Average: 241.247
Monoisotopic: 241.106255975
Chemical Formula
C10H15N3O4
InChI Key
ADVCGXWUUOVPPB-XLPZGREQSA-N
InChI
InChI=1S/C10H15N3O4/c1-5-3-13(10(16)12-9(5)15)8-2-6(11)7(4-14)17-8/h3,6-8,14H,2,4,11H2,1H3,(H,12,15,16)/t6-,7+,8+/m0/s1
IUPAC Name
1-[(2R,4S,5S)-4-amino-5-(hydroxymethyl)oxolan-2-yl]-5-methyl-1,2,3,4-tetrahydropyrimidine-2,4-dione
SMILES
CC1=CN([C@H]2C[C@H](N)[C@@H](CO)O2)C(=O)NC1=O
Reactions
Spectra
SpectrumSpectrum TypeSplash Key
Predicted MS/MS Spectrum - 10V, Negative (Annotated)Predicted LC-MS/MSsplash10-014l-0940000000-43d4bbf0666d42c18ade
Predicted MS/MS Spectrum - 10V, Positive (Annotated)Predicted LC-MS/MSsplash10-002b-9410000000-431d5fc7b1186a087460
Predicted MS/MS Spectrum - 20V, Negative (Annotated)Predicted LC-MS/MSsplash10-0006-9410000000-87d795b53821c198692d
Predicted MS/MS Spectrum - 20V, Positive (Annotated)Predicted LC-MS/MSsplash10-000t-9100000000-29024066a6032103cca6
Predicted MS/MS Spectrum - 40V, Negative (Annotated)Predicted LC-MS/MSsplash10-00kf-9810000000-0ecc81f6586b617f0c65
Predicted MS/MS Spectrum - 40V, Positive (Annotated)Predicted LC-MS/MSsplash10-0ke9-4910000000-d6e893c8fe7938673fc2
Chromatographic Properties
Collision Cross Sections (CCS)
AdductCCS Value (Å2)Source typeSource
[M-H]-160.605
predicted
DeepCCS 1.0 (2019)
[M+H]+163.00058
predicted
DeepCCS 1.0 (2019)
[M+Na]+168.91312
predicted
DeepCCS 1.0 (2019)
ChemSpider
97175
BindingDB
50132294
ChEMBL
CHEMBL103356
ZINC
ZINC000006069509
Predicted Properties
PropertyValueSource
Water Solubility50.8 mg/mLALOGPS
logP-1.8ALOGPS
logP-1.5Chemaxon
logS-0.68ALOGPS
pKa (Strongest Acidic)10Chemaxon
pKa (Strongest Basic)8.85Chemaxon
Physiological Charge1Chemaxon
Hydrogen Acceptor Count5Chemaxon
Hydrogen Donor Count3Chemaxon
Polar Surface Area104.89 Å2Chemaxon
Rotatable Bond Count2Chemaxon
Refractivity57.07 m3·mol-1Chemaxon
Polarizability23.56 Å3Chemaxon
Number of Rings2Chemaxon
Bioavailability1Chemaxon
Rule of FiveYesChemaxon
Ghose FilterNoChemaxon
Veber's RuleNoChemaxon
MDDR-like RuleNoChemaxon