Isopentenyl-diphosphate delta-isomerase

Details

Name
Isopentenyl-diphosphate delta-isomerase
Synonyms
  • 5.3.3.2
  • idi
  • IDI-2
  • IPP isomerase
  • Isopentenyl diphosphate:dimethylallyl diphosphate isomerase
  • Isopentenyl pyrophosphate isomerase
  • Type 2 isopentenyl diphosphate isomerase
  • ypgA
Gene Name
fni
Organism
Bacillus subtilis (strain 168)
Amino acid sequence
>lcl|BSEQ0005938|Isopentenyl-diphosphate delta-isomerase
MTRAERKRQHINHALSIGQKRETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFI
NAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIF
ANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVP
VIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAA
SLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQ
LILEELKLIMTVLGARTIADLQKAPLVIKGETHHWLTERGVNTSSYSVR
Number of residues
349
Molecular Weight
37220.19
Theoretical pI
6.64
GO Classification
Functions
FMN binding / isopentenyl-diphosphate delta-isomerase activity / magnesium ion binding / NADPH binding / oxidoreductase activity
Processes
isoprenoid biosynthetic process
Components
cytoplasm
General Function
Oxidoreductase activity
Specific Function
Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
Pfam Domain Function
Transmembrane Regions
Not Available
Cellular Location
Cytoplasm
Gene sequence
>lcl|BSEQ0020644|Isopentenyl-diphosphate delta-isomerase (fni)
GTGACTCGAGCAGAACGAAAAAGACAACACATCAATCATGCCTTGTCCATCGGCCAGAAG
CGGGAAACAGGTCTTGATGATATTACGTTTGTTCACGTCAGTCTGCCCGATCTTGCATTA
GAACAAGTAGATATTTCCACAAAAATCGGCGAACTTTCAAGCAGTTCGCCGATTTTTATC
AATGCAATGACTGGCGGCGGCGGAAAACTTACATATGAGATTAATAAATCGCTTGCGCGA
GCGGCTTCTCAGGCTGGAATTCCCCTTGCTGTGGGATCGCAAATGTCAGCATTAAAAGAT
CCATCAGAGCGTCTTTCCTATGAAATTGTTCGAAAGGAAAACCCAAACGGGCTGATTTTT
GCCAACCTGGGAAGCGAGGCAACGGCTGCTCAGGCAAAGGAAGCCGTTGAGATGATTGGA
GCAAACGCACTGCAGATCCACCTCAATGTGATTCAGGAAATTGTGATGCCTGAAGGGGAC
AGAAGCTTTAGCGGCGCATTGAAACGCATTGAACAAATTTGCAGCCGGGTCAGTGTACCG
GTCATTGTGAAAGAAGTCGGCTTCGGTATGAGCAAAGCATCAGCAGGAAAGCTGTATGAA
GCTGGTGCTGCAGCTGTTGACATTGGCGGTTACGGGGGAACAAATTTCTCGAAAATCGAA
AATCTCCGAAGACAGCGGCAAATCTCCTTTTTTAATTCGTGGGGCATTTCGACAGCTGCA
AGTTTGGCGGAAATCCGCTCTGAGTTTCCTGCAAGCACCATGATCGCCTCTGGCGGTCTG
CAAGATGCGCTTGACGTGGCAAAGGCAATTGCGCTGGGGGCCTCTTGCACCGGAATGGCA
GGGCATTTTTTAAAAGCGCTGACTGACAGCGGTGAGGAAGGACTGCTTGAGGAGATTCAG
CTGATCCTTGAGGAATTAAAGTTGATTATGACCGTGCTGGGTGCCAGAACAATTGCCGAT
TTACAAAAGGCGCCCCTTGTGATCAAAGGTGAAACCCATCATTGGCTCACAGAGAGAGGG
GTCAATACATCAAGCTATAGTGTGCGATAA
Chromosome Location
Not Available
Locus
Not Available
External Identifiers
ResourceLink
UniProtKB IDP50740
UniProtKB Entry NameIDI2_BACSU
GenBank Gene IDAB047343
General References
  1. Sorokin A, Azevedo V, Zumstein E, Galleron N, Ehrlich SD, Serror P: Sequence analysis of the Bacillus subtilis chromosome region between the serA and kdg loci cloned in a yeast artificial chromosome. Microbiology. 1996 Aug;142 ( Pt 8):2005-16. [Article]
  2. Kunst F, Ogasawara N, Moszer I, Albertini AM, Alloni G, Azevedo V, Bertero MG, Bessieres P, Bolotin A, Borchert S, Borriss R, Boursier L, Brans A, Braun M, Brignell SC, Bron S, Brouillet S, Bruschi CV, Caldwell B, Capuano V, Carter NM, Choi SK, Cordani JJ, Connerton IF, Cummings NJ, Daniel RA, Denziot F, Devine KM, Dusterhoft A, Ehrlich SD, Emmerson PT, Entian KD, Errington J, Fabret C, Ferrari E, Foulger D, Fritz C, Fujita M, Fujita Y, Fuma S, Galizzi A, Galleron N, Ghim SY, Glaser P, Goffeau A, Golightly EJ, Grandi G, Guiseppi G, Guy BJ, Haga K, Haiech J, Harwood CR, Henaut A, Hilbert H, Holsappel S, Hosono S, Hullo MF, Itaya M, Jones L, Joris B, Karamata D, Kasahara Y, Klaerr-Blanchard M, Klein C, Kobayashi Y, Koetter P, Koningstein G, Krogh S, Kumano M, Kurita K, Lapidus A, Lardinois S, Lauber J, Lazarevic V, Lee SM, Levine A, Liu H, Masuda S, Mauel C, Medigue C, Medina N, Mellado RP, Mizuno M, Moestl D, Nakai S, Noback M, Noone D, O'Reilly M, Ogawa K, Ogiwara A, Oudega B, Park SH, Parro V, Pohl TM, Portelle D, Porwollik S, Prescott AM, Presecan E, Pujic P, Purnelle B, Rapoport G, Rey M, Reynolds S, Rieger M, Rivolta C, Rocha E, Roche B, Rose M, Sadaie Y, Sato T, Scanlan E, Schleich S, Schroeter R, Scoffone F, Sekiguchi J, Sekowska A, Seror SJ, Serror P, Shin BS, Soldo B, Sorokin A, Tacconi E, Takagi T, Takahashi H, Takemaru K, Takeuchi M, Tamakoshi A, Tanaka T, Terpstra P, Togoni A, Tosato V, Uchiyama S, Vandebol M, Vannier F, Vassarotti A, Viari A, Wambutt R, Wedler H, Weitzenegger T, Winters P, Wipat A, Yamamoto H, Yamane K, Yasumoto K, Yata K, Yoshida K, Yoshikawa HF, Zumstein E, Yoshikawa H, Danchin A: The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Nature. 1997 Nov 20;390(6657):249-56. [Article]
  3. Steinbacher S, Kaiser J, Gerhardt S, Eisenreich W, Huber R, Bacher A, Rohdich F: Crystal structure of the type II isopentenyl diphosphate:dimethylallyl diphosphate isomerase from Bacillus subtilis. J Mol Biol. 2003 Jun 20;329(5):973-82. [Article]

Drug Relations

Drug Relations
DrugBank IDNameDrug groupPharmacological action?ActionsDetails
DB03247Flavin mononucleotideapproved, investigationalunknownDetails