Arabinogalactan endo-beta-1,4-galactanase

Details

Name
Arabinogalactan endo-beta-1,4-galactanase
Synonyms
  • 3.2.1.89
  • Endo-1,4-beta-galactanase
  • galA
  • Galactanase
  • yvfO
Gene Name
ganB
Organism
Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46)
Amino acid sequence
>lcl|BSEQ0005353|Arabinogalactan endo-beta-1,4-galactanase
MKNVLAVFVVLIFVLGAFGTSGPAEAARDSGTAKSGLYVEKVSGLRKDFIKGVDVSSIIA
LEESGVAFYNESGKKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIG
KRATANGMKLLADFHYSDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGI
DIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETSGRYAWI
AETLHRHHVDYDVFASSYYPFWHGTLKNLTSVLTSVADTYGKKVMVAETSYTYTAEDGDG
HGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWEPAWIPVGPAHRLEK
NKALWETYGSGWATSYAAEYDPEDAGKWFGGSAVDNQALFDFKGRPLPSLHVFQYVDTGT
PFKN
Number of residues
424
Molecular Weight
46224.425
Theoretical pI
6.25
GO Classification
Functions
arabinogalactan endo-1,4-beta-galactosidase activity / glucosidase activity / metal ion binding
Processes
carbohydrate metabolic process
General Function
Metal ion binding
Specific Function
Hydrolyzes the beta-1,4-galactan linkages of arabinogalactan type I, a pectic substance found in plants such as soybeans.
Pfam Domain Function
Transmembrane Regions
Not Available
Cellular Location
Cytoplasmic
Gene sequence
>lcl|BSEQ0016876|Arabinogalactan endo-beta-1,4-galactanase (ganB)
ATGAAGAACGTGCTGGCTGTTTTTGTGGTGCTGATATTTGTTTTGGGCGCATTTGGAACA
AGCGGTCCGGCGGAAGCCGCCAGAGATTCAGGGACGGCAAAAAGCGGCCTTTATGTTGAA
AAGGTTTCAGGGCTTCGCAAGGATTTTATAAAAGGGGTTGATGTTTCGAGCATCATCGCT
TTGGAAGAGAGCGGCGTCGCCTTTTACAATGAATCCGGAAAGAAACAGGATATATTCAAA
ACGCTGAAGGAAGCAGGCGTCAATTATGTCCGGGTGCGCATATGGAATGATCCCTATGAT
GCCAACGGCAACGGCTACGGAGGGGGCAATAATGATCTGGAAAAAGCGATTCAGATCGGA
AAACGGGCCACTGCCAACGGAATGAAGCTGCTGGCGGATTTCCACTATTCCGATTTCTGG
GCGGACCCGGCGAAACAGAAAGCGCCGAAAGCATGGGCGAACCTAAACTTTGAAGATAAA
AAGACGGCGCTTTATCAATATACAAAACAAAGCCTTAAAGCGATGAAAGCAGCGGGCATC
GACATCGGCATGGTGCAGGTCGGTAACGAAACAAACGGGGGCCTTGCCGGTGAAACGGAT
TGGGCGAAGATGAGCCAATTATTCAACGCCGGGAGTCAAGCGGTGCGAGAGACGGATTCG
AATATCCTAGTCGCCTTGCATTTTACCAATCCGGAGACGTCAGGAAGGTACGCTTGGATT
GCCGAGACGCTTCATCGGCATCATGTAGACTACGATGTGTTTGCAAGCTCGTATTATCCG
TTTTGGCATGGCACGCTGAAGAATTTAACATCCGTCCTGACATCTGTCGCAGATACGTAC
GGCAAAAAAGTCATGGTTGCTGAGACATCTTATACGTATACGGCTGAAGACGGAGACGGA
CACGGAAATACAGCTCCGAAAAACGGCCAAACGCTGAATAATCCGGTCACCGTTCAAGGG
CAGGCGAACGCGGTCCGTGATGTGATTCAAGCGGTCAGCGACGTAGGTGAAGCCGGAATC
GGCGTTTTCTATTGGGAACCGGCATGGATTCCGGTAGGACCGGCTCACCGGCTCGAGAAA
AATAAAGCGCTTTGGGAGACATACGGATCAGGCTGGGCTACAAGCTATGCTGCTGAATAT
GACCCGGAAGACGCAGGAAAGTGGTTTGGCGGCAGCGCCGTAGACAATCAGGCATTGTTT
GATTTTAAAGGACGTCCATTGCCGTCGCTTCATGTGTTTCAATATGTTGATACGGGAACA
CCATTCAAAAATTGA
Chromosome Location
Not Available
Locus
Not Available
External Identifiers
ResourceLink
UniProtKB IDQ65CX5
UniProtKB Entry NameGANA_BACLD
GenBank Gene IDAE017333
General References
  1. Veith B, Herzberg C, Steckel S, Feesche J, Maurer KH, Ehrenreich P, Baumer S, Henne A, Liesegang H, Merkl R, Ehrenreich A, Gottschalk G: The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential. J Mol Microbiol Biotechnol. 2004;7(4):204-11. [Article]
  2. Rey MW, Ramaiya P, Nelson BA, Brody-Karpin SD, Zaretsky EJ, Tang M, Lopez de Leon A, Xiang H, Gusti V, Clausen IG, Olsen PB, Rasmussen MD, Andersen JT, Jorgensen PL, Larsen TS, Sorokin A, Bolotin A, Lapidus A, Galleron N, Ehrlich SD, Berka RM: Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species. Genome Biol. 2004;5(10):R77. Epub 2004 Sep 13. [Article]
  3. Ryttersgaard C, Le Nours J, Lo Leggio L, Jorgensen CT, Christensen LL, Bjornvad M, Larsen S: The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. J Mol Biol. 2004 Jul 30;341(1):107-17. [Article]

Drug Relations

Drug Relations
DrugBank IDNameDrug groupPharmacological action?ActionsDetails
DB02327Triethylene glycolexperimentalunknownDetails
DB02743beta-D-galactopyranosyl-(1->4)-beta-D-galactopyranoseexperimentalunknownDetails
DB04248beta-(1->4)-galactotrioseexperimentalunknownDetails