Arabinogalactan endo-beta-1,4-galactanase
Details
- Name
- Arabinogalactan endo-beta-1,4-galactanase
- Synonyms
- 3.2.1.89
- Endo-1,4-beta-galactanase
- galA
- Galactanase
- yvfO
- Gene Name
- ganB
- Organism
- Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46)
- Amino acid sequence
>lcl|BSEQ0005353|Arabinogalactan endo-beta-1,4-galactanase MKNVLAVFVVLIFVLGAFGTSGPAEAARDSGTAKSGLYVEKVSGLRKDFIKGVDVSSIIA LEESGVAFYNESGKKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIG KRATANGMKLLADFHYSDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGI DIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETSGRYAWI AETLHRHHVDYDVFASSYYPFWHGTLKNLTSVLTSVADTYGKKVMVAETSYTYTAEDGDG HGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWEPAWIPVGPAHRLEK NKALWETYGSGWATSYAAEYDPEDAGKWFGGSAVDNQALFDFKGRPLPSLHVFQYVDTGT PFKN
- Number of residues
- 424
- Molecular Weight
- 46224.425
- Theoretical pI
- 6.25
- GO Classification
- Functionsarabinogalactan endo-1,4-beta-galactosidase activity / glucosidase activity / metal ion bindingProcessescarbohydrate metabolic process
- General Function
- Metal ion binding
- Specific Function
- Hydrolyzes the beta-1,4-galactan linkages of arabinogalactan type I, a pectic substance found in plants such as soybeans.
- Pfam Domain Function
- Glyco_hydro_53 (PF07745)
- Transmembrane Regions
- Not Available
- Cellular Location
- Cytoplasmic
- Gene sequence
>lcl|BSEQ0016876|Arabinogalactan endo-beta-1,4-galactanase (ganB) ATGAAGAACGTGCTGGCTGTTTTTGTGGTGCTGATATTTGTTTTGGGCGCATTTGGAACA AGCGGTCCGGCGGAAGCCGCCAGAGATTCAGGGACGGCAAAAAGCGGCCTTTATGTTGAA AAGGTTTCAGGGCTTCGCAAGGATTTTATAAAAGGGGTTGATGTTTCGAGCATCATCGCT TTGGAAGAGAGCGGCGTCGCCTTTTACAATGAATCCGGAAAGAAACAGGATATATTCAAA ACGCTGAAGGAAGCAGGCGTCAATTATGTCCGGGTGCGCATATGGAATGATCCCTATGAT GCCAACGGCAACGGCTACGGAGGGGGCAATAATGATCTGGAAAAAGCGATTCAGATCGGA AAACGGGCCACTGCCAACGGAATGAAGCTGCTGGCGGATTTCCACTATTCCGATTTCTGG GCGGACCCGGCGAAACAGAAAGCGCCGAAAGCATGGGCGAACCTAAACTTTGAAGATAAA AAGACGGCGCTTTATCAATATACAAAACAAAGCCTTAAAGCGATGAAAGCAGCGGGCATC GACATCGGCATGGTGCAGGTCGGTAACGAAACAAACGGGGGCCTTGCCGGTGAAACGGAT TGGGCGAAGATGAGCCAATTATTCAACGCCGGGAGTCAAGCGGTGCGAGAGACGGATTCG AATATCCTAGTCGCCTTGCATTTTACCAATCCGGAGACGTCAGGAAGGTACGCTTGGATT GCCGAGACGCTTCATCGGCATCATGTAGACTACGATGTGTTTGCAAGCTCGTATTATCCG TTTTGGCATGGCACGCTGAAGAATTTAACATCCGTCCTGACATCTGTCGCAGATACGTAC GGCAAAAAAGTCATGGTTGCTGAGACATCTTATACGTATACGGCTGAAGACGGAGACGGA CACGGAAATACAGCTCCGAAAAACGGCCAAACGCTGAATAATCCGGTCACCGTTCAAGGG CAGGCGAACGCGGTCCGTGATGTGATTCAAGCGGTCAGCGACGTAGGTGAAGCCGGAATC GGCGTTTTCTATTGGGAACCGGCATGGATTCCGGTAGGACCGGCTCACCGGCTCGAGAAA AATAAAGCGCTTTGGGAGACATACGGATCAGGCTGGGCTACAAGCTATGCTGCTGAATAT GACCCGGAAGACGCAGGAAAGTGGTTTGGCGGCAGCGCCGTAGACAATCAGGCATTGTTT GATTTTAAAGGACGTCCATTGCCGTCGCTTCATGTGTTTCAATATGTTGATACGGGAACA CCATTCAAAAATTGA
- Chromosome Location
- Not Available
- Locus
- Not Available
- External Identifiers
Resource Link UniProtKB ID Q65CX5 UniProtKB Entry Name GANA_BACLD GenBank Gene ID AE017333 - General References
- Veith B, Herzberg C, Steckel S, Feesche J, Maurer KH, Ehrenreich P, Baumer S, Henne A, Liesegang H, Merkl R, Ehrenreich A, Gottschalk G: The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential. J Mol Microbiol Biotechnol. 2004;7(4):204-11. [Article]
- Rey MW, Ramaiya P, Nelson BA, Brody-Karpin SD, Zaretsky EJ, Tang M, Lopez de Leon A, Xiang H, Gusti V, Clausen IG, Olsen PB, Rasmussen MD, Andersen JT, Jorgensen PL, Larsen TS, Sorokin A, Bolotin A, Lapidus A, Galleron N, Ehrlich SD, Berka RM: Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species. Genome Biol. 2004;5(10):R77. Epub 2004 Sep 13. [Article]
- Ryttersgaard C, Le Nours J, Lo Leggio L, Jorgensen CT, Christensen LL, Bjornvad M, Larsen S: The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. J Mol Biol. 2004 Jul 30;341(1):107-17. [Article]