Metabolite 6-(hydroxymethyl)uracil

Name
6-(hydroxymethyl)uracil
Description
Not Available
Structure
Synonyms
Not Available
UNII
PNS2EUP1Y2
CAS number
Not Available
Weight
Average: 142.114
Monoisotopic: 142.037842061
Chemical Formula
C5H6N2O3
InChI Key
JVZRLPFSWSIONO-UHFFFAOYSA-N
InChI
InChI=1S/C5H6N2O3/c8-2-3-1-4(9)7-5(10)6-3/h1,8H,2H2,(H2,6,7,9,10)
IUPAC Name
6-(hydroxymethyl)-1,2,3,4-tetrahydropyrimidine-2,4-dione
SMILES
OCC1=CC(=O)NC(=O)N1
Reactions
Spectra
SpectrumSpectrum TypeSplash Key
Predicted MS/MS Spectrum - 10V, Positive (Annotated)Predicted LC-MS/MSsplash10-0006-0900000000-976f4397093788eaf48b
Predicted MS/MS Spectrum - 10V, Negative (Annotated)Predicted LC-MS/MSsplash10-0006-5900000000-49fb00acc07cb86b76bc
Predicted MS/MS Spectrum - 20V, Positive (Annotated)Predicted LC-MS/MSsplash10-0f8c-9700000000-46be9b4a374a4780268f
Predicted MS/MS Spectrum - 20V, Negative (Annotated)Predicted LC-MS/MSsplash10-0006-9000000000-0cd544b793c636ed1aee
Predicted MS/MS Spectrum - 40V, Positive (Annotated)Predicted LC-MS/MSsplash10-014u-9000000000-73c493fc9d74af2805f2
Predicted MS/MS Spectrum - 40V, Negative (Annotated)Predicted LC-MS/MSsplash10-0006-9000000000-8df9013f8ac75661f24c
Chromatographic Properties
Collision Cross Sections (CCS)
AdductCCS Value (Å2)Source typeSource
[M-H]-128.8793038
predicted
DarkChem Lite v0.1.0
[M-H]-124.65164
predicted
DeepCCS 1.0 (2019)
[M+H]+130.1580038
predicted
DarkChem Lite v0.1.0
[M+H]+127.77033
predicted
DeepCCS 1.0 (2019)
[M+Na]+129.6807038
predicted
DarkChem Lite v0.1.0
[M+Na]+136.5111
predicted
DeepCCS 1.0 (2019)
ChemSpider
87726
ZINC
ZINC000001686180
Predicted Properties
PropertyValueSource
Water Solubility13.3 mg/mLALOGPS
logP-1.2ALOGPS
logP-1.7Chemaxon
logS-1ALOGPS
pKa (Strongest Acidic)8.75Chemaxon
pKa (Strongest Basic)-2.9Chemaxon
Physiological Charge0Chemaxon
Hydrogen Acceptor Count3Chemaxon
Hydrogen Donor Count3Chemaxon
Polar Surface Area78.43 Å2Chemaxon
Rotatable Bond Count1Chemaxon
Refractivity33.33 m3·mol-1Chemaxon
Polarizability12.39 Å3Chemaxon
Number of Rings1Chemaxon
Bioavailability1Chemaxon
Rule of FiveYesChemaxon
Ghose FilterNoChemaxon
Veber's RuleNoChemaxon
MDDR-like RuleNoChemaxon