ABC transporter, periplasmic substrate-binding protein
Details
- Name
- ABC transporter, periplasmic substrate-binding protein
- Synonyms
- Not Available
- Gene Name
- Not Available
- Organism
- Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
- Amino acid sequence
>lcl|BSEQ0022451|ABC transporter, periplasmic substrate-binding protein MRPDYFRPFRPLTAGIALLLGASFADAESRHAIAMYGAPALPPDFVSLPYANPDAPKGGR VVFGNTGGFDSLNPFAQKGTFPWQMPFWSYESLMGRSWDEPFTLYGLLAESVEVPPDRAW VEFTLREEARFSDGSPVTVEDVIWSYQTLGTEGHLRYRGFWSRIASIEATGPRSLRITFA DEDRELAMLAGLRPILQKAQWEGRSLSEGNIHDIPIGTGPYVVSAYEPGRYVTFARNPDY WGADLGFRRGTMNFDEMRIDFFGDGTVLMEAFKAGELSAIREFNAQKWDSAYDFPAAQRG DVIKTEIAHGKPSGMTGFVINTRRAPFDDWRLREALLLAFNFEFINDTVTGGVMPRITSY FSGTDLAYRPGTASGREAELLAPFAADLPPGTLEGYALPQGDGTARNRTNLRRAAQFLEQ AGFRIEQGQLLGPDGAPLALRFLLRQGDSDMQTVLEIYTRALERLGIAAQIEKVDNAQYT ARVAELDFDLTPFRRDLSLSPGNEQRLYWGSHSAGQPGTRNLMGAASPAIDAMIDRMLAA TTEDELTAATRALDRVLTAGRYVIPIWRFDVGRIAHIRQLRFPPNPPIYGDGPQYMPDVW WYQD
- Number of residues
- 604
- Molecular Weight
- 67355.245
- Theoretical pI
- 4.87
- GO Classification
- Processestransmembrane transportComponentsATP-binding cassette (ABC) transporter complex
- General Function
- Not Available
- Specific Function
- Not Available
- Pfam Domain Function
- SBP_bac_5 (PF00496)
- Transmembrane Regions
- Not Available
- Cellular Location
- Not Available
- Gene sequence
>lcl|BSEQ0022452|ABC transporter, periplasmic substrate-binding protein GTGCGACCAGATTATTTCCGACCCTTCCGCCCGCTGACGGCGGGAATCGCCCTTCTATTG GGCGCCAGTTTCGCCGATGCAGAATCACGCCATGCCATAGCTATGTATGGCGCACCTGCC TTGCCACCGGATTTTGTGTCCCTGCCCTATGCCAACCCGGACGCGCCCAAAGGCGGGCGC GTGGTGTTCGGCAACACCGGCGGCTTTGACAGCCTCAATCCCTTTGCCCAGAAAGGCACC TTTCCCTGGCAGATGCCCTTCTGGTCTTACGAAAGCCTGATGGGCCGATCCTGGGACGAA CCCTTCACGCTTTACGGTCTTTTGGCCGAATCGGTCGAGGTGCCGCCGGACCGCGCATGG GTCGAATTCACCCTGCGCGAGGAGGCCCGATTCTCGGATGGCAGCCCGGTCACGGTCGAG GATGTGATCTGGTCCTACCAGACCCTGGGCACCGAGGGGCATCTGCGCTATCGCGGATTC TGGTCGCGCATTGCGTCGATCGAGGCAACCGGGCCGCGCAGCCTGCGCATCACATTCGCC GACGAGGATCGCGAACTGGCGATGCTGGCGGGCCTGCGCCCGATCCTGCAAAAGGCCCAG TGGGAGGGGCGCAGCCTGTCCGAGGGCAATATTCACGACATTCCTATCGGCACCGGCCCC TATGTGGTCTCGGCTTATGAGCCGGGGCGCTACGTGACCTTTGCCCGCAACCCCGACTAT TGGGGCGCCGATCTGGGCTTTCGCCGCGGCACGATGAATTTCGACGAGATGCGGATCGAC TTTTTCGGCGACGGCACGGTGTTGATGGAAGCGTTCAAGGCCGGTGAGCTGAGTGCCATT CGCGAGTTCAACGCCCAGAAATGGGACAGCGCCTATGACTTCCCCGCCGCCCAGCGTGGC GATGTGATCAAGACCGAAATCGCCCATGGCAAGCCCTCGGGCATGACCGGTTTCGTGATC AATACCCGGCGCGCGCCTTTCGATGACTGGCGCCTGCGCGAGGCGCTGCTGTTGGCCTTC AACTTCGAATTCATCAACGACACGGTGACCGGCGGGGTGATGCCGCGCATCACCTCGTAT TTCTCGGGCACCGATCTGGCCTATCGGCCCGGCACCGCCAGCGGGCGCGAGGCCGAATTG CTGGCCCCCTTTGCCGCCGATCTGCCGCCCGGCACACTCGAAGGCTATGCCTTGCCCCAG GGCGATGGCACCGCACGCAACCGCACCAATCTGCGCCGTGCCGCGCAATTTCTGGAACAG GCCGGGTTCCGCATCGAGCAGGGTCAGTTGCTGGGGCCGGACGGTGCGCCGCTGGCGCTG CGGTTTCTGCTGCGGCAGGGCGACAGCGACATGCAGACGGTGCTCGAGATCTATACCCGC GCGCTGGAGCGGCTGGGTATCGCGGCCCAGATCGAAAAGGTGGACAACGCGCAATATACC GCCCGCGTCGCCGAGCTCGATTTCGACCTGACTCCGTTCCGGCGTGACCTTTCGTTGTCG CCGGGCAATGAACAGCGGCTTTACTGGGGTTCGCACAGCGCGGGCCAGCCGGGCACCCGC AACCTGATGGGCGCGGCCTCGCCCGCCATTGACGCGATGATCGACAGGATGCTGGCGGCC ACCACCGAGGACGAGCTGACCGCCGCCACCCGTGCACTGGACCGGGTGCTGACCGCCGGG CGCTATGTGATCCCGATCTGGCGCTTCGATGTGGGGCGCATCGCCCATATCCGGCAACTG CGCTTCCCGCCAAACCCGCCGATCTATGGCGACGGGCCGCAATACATGCCGGATGTCTGG TGGTACCAGGACTGA
- Chromosome Location
- Not Available
- Locus
- Not Available
- External Identifiers
Resource Link UniProtKB ID Q5LRQ9 UniProtKB Entry Name Q5LRQ9_RUEPO GenBank Protein ID 56676666 GenBank Gene ID CP000031 - General References
- Moran MA, Buchan A, Gonzalez JM, Heidelberg JF, Whitman WB, Kiene RP, Henriksen JR, King GM, Belas R, Fuqua C, Brinkac L, Lewis M, Johri S, Weaver B, Pai G, Eisen JA, Rahe E, Sheldon WM, Ye W, Miller TR, Carlton J, Rasko DA, Paulsen IT, Ren Q, Daugherty SC, Deboy RT, Dodson RJ, Durkin AS, Madupu R, Nelson WC, Sullivan SA, Rosovitz MJ, Haft DH, Selengut J, Ward N: Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment. Nature. 2004 Dec 16;432(7019):910-3. [Article]
- Rivers AR, Smith CB, Moran MA: An Updated genome annotation for the model marine bacterium Ruegeria pomeroyi DSS-3. Stand Genomic Sci. 2014 Dec 8;9:11. doi: 10.1186/1944-3277-9-11. eCollection 2014. [Article]