A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map.
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Itoh T, Aiba H, Baba T, Hayashi K, Inada T, Isono K, Kasai H, Kimura S, Kitakawa M, Kitagawa M, Makino K, Miki T, Mizobuchi K, Mori H, Mori T, Motomura K, Nakade S, Nakamura Y, Nashimoto H, Nishio Y, Oshima T, Saito N, Sampei G, Seki Y, Horiuchi T, et al.
A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map.
DNA Res. 1996 Dec 31;3(6):379-92.
- PubMed ID
- 9097040 [ View in PubMed]
- Abstract
The 465,813 base pair sequence corresponding to the 40.1-50.0 min region on the genetic map of Escherichia coli K-12 (W3110) was determined. Analysis of the sequence revealed that this region contained at least 466 potential open reading frames, of which 187 (40%) were previously reported, 105 (23%) were homologous to other known genes, 103 (22%) were identical or similar to hypothetical genes registered in databases, and the remaining 71 (15%) did not show a significant similarity to any other gene. At the 45.2-46.0 min region, we found a very large cluster of about 30 genes, whose functions are involved in the biosynthesis of polysaccharides as the components of outer membranes. In addition, we identified a new asn-tRNA gene, designated asnW, between the asnT and asnU genes and a new lysogenic phage attachment site as the cis-element.
DrugBank Data that Cites this Article
- Polypeptides
Name UniProt ID Aminodeoxychorismate synthase component 1 P05041 Details ATP phosphoribosyltransferase P60757 Details Alpha,alpha-trehalose-phosphate synthase [UDP-forming] P31677 Details Histidinol-phosphate aminotransferase P06986 Details Deoxycytidine triphosphate deaminase P28248 Details Phosphoribosylglycinamide formyltransferase 2 P33221 Details L-arabinose-binding periplasmic protein P02924 Details UDP-galactopyranose mutase P37747 Details Histidinol dehydrogenase P06988 Details GDP-mannose mannosyl hydrolase P32056 Details GDP-L-fucose synthase P32055 Details Chemotaxis protein CheY P0AE67 Details AMP nucleosidase P0AE12 Details KHG/KDPG aldolase P0A955 Details Ecotin P23827 Details Free methionine-R-sulfoxide reductase P76270 Details Regulatory protein SdiA P07026 Details Outer membrane porin C P06996 Details